Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00149 ATGGAATTTTGGCCAGAATTTCTTGCTAGTAGTACGGGTAAAGAGTTTGTAGCTGGAGGATTTGGAGGCACTGCTGGTATAATCTCCGGTTACCCATTAGACACGCTCCGTGTGATGCAACAAAACTCCAACAATGGCTCTGCTTTCACCATCCTCAGAAATTTGGTGGCCAAGGAAGGACCAACTACTCTGTACCGTGGCATGGCTGCACCTTTGGCCTCTGTTACCTTTCAGAACGCTATGGTTTTCCAAATTTACGCAGTTCTCTCAAGGGCATTTAGCACGTCCGTTTCTGTTAACGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGGGGATTTTGCTCCGGCGCTTTGCAGAGCATGTTGCTGTCTCCTGTTGAGTTACTTAAAATTCGCCTTCAGCTTCAGAACACAGGCCAATCCACAGAACCACAAAAGGGTCCCATAAGGGTTGCCAACAACATATGGAAAAGAGAGGGTCTTCGTGGCATTTATCGAGGACTTGGCATCACTATACTAAGAGATGCACCTGCGCATGGCCTTTACTTTTGGACATATGAATACGCGAGGGAGAAACTTCACCCAGGTTGCAGAAAAAGTTGTGGAGAGAGCTTGAATACTATGTTGGTATCAGGAGGATTGGCCGGGGTTGTGAGTTGGGTTTTCAGCTACCCTTTGGACGTTATAAAGACAAGATTGCAGGCTCAGACATTTTCTTCGCTGAAATACAAAGGCATTTTGGATTGTCTTCGGAAGAGCGTTGAAGAGGAAGGATACGTTGTTCTATGGCGGGGTTTAGGAACTGCGGTTGCTAGAGCGTTTGTTGTGAATGGTGCTATATTTTCTGCTTATGAGATCACTCTTAGGTGTCTGTTTGACAAATAA 885 0.4599 MEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVMQQNSNNGSAFTILRNLVAKEGPTTLYRGMAAPLASVTFQNAMVFQIYAVLSRAFSTSVSVNDPPSYKGVALGGFCSGALQSMLLSPVELLKIRLQLQNTGQSTEPQKGPIRVANNIWKREGLRGIYRGLGITILRDAPAHGLYFWTYEYAREKLHPGCRKSCGESLNTMLVSGGLAGVVSWVFSYPLDVIKTRLQAQTFSSLKYKGILDCLRKSVEEEGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFDK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00149 294 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Gma15g00149 294 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Gma15g00149 294 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Gma15g00149 294 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Gma15g00149 294 SUPERFAMILY Mitochondrial carrier 12 285 IPR023395 -
Gma15g00149 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Gma15g00149 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Gma15g00149 294 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Gma15g00149 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Gma15g00149 294 Gene3D Mitochondrial carrier domain 8 294 IPR023395 -
Gma15g00149 294 Pfam Mitochondrial carrier protein 109 193 IPR018108 -
Gma15g00149 294 Pfam Mitochondrial carrier protein 208 293 IPR018108 -
Gma15g00149 294 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Gma15g00149 294 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00149 Gma-Chr15 1224414 1226791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00149 1 294 Antiporters AT1G79900 70.508 8.21e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00149 K15109 - gmx:100801221 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00149 15 1224414 1226791 Gma15g00149 15 1224414 1226791 ECH