Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00142 ATGCCCAAGAAAATTCGAGATTACCTCTTCAAAATAAAAAACCCTCGCCCTCAAGTCCGGTTACCCTCTAAGAACTGGATTCTCTCTGGCTGCAAGCATCCTAGGACCCCTTCCTTTGCCTTATACAGTGGTAGAAACCAATCTCATCATAATCCTGTTCTCAACAACAATAACAATAACGATGCTGCCACCTTAGCAGACGTTGATCGTTTCCTCATGGAGAATTTCAAGTCTCTATACCTCAAAGACGAACATGATCATCAAAACCACGACCAAGAAATTACAACGCCACGTGATCTTCCTGGCTCGACCCGATTCTTTGTGAAGCCTGCAGGGTTCTCTGGGTCCCTAGTGGAGGATGCTTTCACAAGTGACGAAGCAGCATCAATCTCAACAATCAACGATGTTTCTTCTTCAAATTCTTATGAGAAGGAGGCTCTTCCGGATAATAGCATCGCTTTATTGACGCGCTCGACCAGCCCCTACGAGGACTTCAAGCGCTCCATGCAAGAAATGGTGAACAACCATGAAAGCGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTGTTACCTTAACCTCAATGAGAAGAAATCGCACAAGTTCATTCTCAGTGCTTTCGTCGATCTCATCACCGTCATGCGTCGGAACTCGGAGACACCTTCCAACAACCCACAGAGCGTTCGAACCGTTAGGAGTCATCGTGGGACCAGAAATGTTACGTTAGAATTTGGGTCCTCCTCCTAG 750 0.4613 MPKKIRDYLFKIKNPRPQVRLPSKNWILSGCKHPRTPSFALYSGRNQSHHNPVLNNNNNNDAATLADVDRFLMENFKSLYLKDEHDHQNHDQEITTPRDLPGSTRFFVKPAGFSGSLVEDAFTSDEAASISTINDVSSSNSYEKEALPDNSIALLTRSTSPYEDFKRSMQEMVNNHESVVDWDFMEELLFCYLNLNEKKSHKFILSAFVDLITVMRRNSETPSNNPQSVRTVRSHRGTRNVTLEFGSSS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00142 249 ProSiteProfiles OVATE domain profile. 154 214 IPR006458 -
Gma15g00142 249 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 152 214 IPR006458 -
Gma15g00142 249 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 227 - -
Gma15g00142 249 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 227 IPR038933 GO:0045892
Gma15g00142 249 Pfam Transcriptional repressor, ovate 158 213 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00142 Gma-Chr15 1180950 1182136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma15g00142 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00142 - - gmx:100527503 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00142 15 1180950 1182136 Gma15g00142 15 1180950 1182136 ECH
Gma15g00142 15 1180950 1182136 Gma08g01893 08 17007474 17008257 PCT
Gma08g01893 08 17007474 17008257 Gma15g00142 15 1180950 1182136 PCT