Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00141 ATGAGCGTGGTTGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTCGCAAGACAAAGGGGGATCGACGTTGTGCTCAATGATGAGTCAAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCTGGGGCTGCTTCTACAATGATGAACCCTAAGAATTCCATCTCTCAGATAAAGAGGTTAATTGGTAGACAGTTTTCTGATCCAGAATTGCAGCGAGACCTGAAGACATTCCCTTTTGTTGTCACTGAAGGACCTGATGGATATCCATTAATTCATGCACGGTACTTGGGTGAAGCTAGAACATTTACACCCACCCAAGTATTTGGAATGATGTTATCAAACCTTAAAGAAATAGCCGAGAAAAATCTGAATGCTGCCGTTGTTGATTGCTGCATTGGAATTCCACTTTATTTTACTGATCTTCAGAGGAGGGCGGTCTTGGATGCTGCTACTATTGCTGGTTTGCATCCACTTCGTCTGTTTCATGAAACAACTGCAACTGCATTGGCTTATGGAATTTATAAGACCGATCTTCCTGAAAATGATCAACTGAATGTTGCCTTTGTTGATGTTGGACATGCTAGCATGCAAGTATGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAATCATATGATAGGTCCCTAGGTGGGAGGGACTTTGACGAGGTTCTGTTCAATCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATTGATGTATTCCAAAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCTTGCGAGAAGCTGAAGAAGGTGCTTagtgctaatcccgaggcacctttgaacattgagtgcttaatggatgagaaggatgtcagaggctttatcaagcgcgatgagtttgagCAACTGAGTCTTCCAATTTTGGAACGGGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAGGCAGGTCTTACAGTTGAGAATGTACACATGGTTGAGGTGGTTGGTTCTGGATCTCGTGTGCCAGCTATAAACAAAATTTTGACAGAGTTCTTTAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGCTGTGCATTGCAGTGTGCAATTCTCAGCCCAACTTTTAAAGTACGGGAGTTTCAGGTCAATGAAAGCTTTCCTTTCTCAATTTCTCTCTCGTGGAAAGGTCCAAGTTCTGATGCACAGGAAAGTGGACCAAATAATACGCAGAGAACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTAACCATCTACAGGTCAGGAACCTTTTCTATTGATGTTCAATATGATGATGTGAGTGAATTGCAAACACCTGCAAAGATCAGCACATATACTATTGGACCTTTCCAATCTACAATAACTGAAAAAGCAAAAGTTAAAGTGAAAGTTCGGTTGAATCTTCATGGAATTGTATCTGTCGAATCTGCAACTCTGCTGGAAGAGGAAGAAATTGAGGTTCCAGTTTCCAAAGAACCAGCAGGAGAAAATACCAAGATGGAAACTGATGAAGCTCCTGCCAATGTTGCTGCACCTCCTAGCACCAATGACAATGATGTTAACATGCAAGATGCTAATTCCAAGGCAACTGCTGATGCCCCTGGGTCCGAAAATGGGACCCCTGAGGCAGGAGATAAGCCTGTGCAAATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAAAAAGTTAAGAAAATAAACATTCCTGTGGTGGAGTTAGTTTATGGGGCAATGGCAGCTGCAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATAGAGTGATGGAGGAAACAAAGGATAAGAAAAATGCAGTAGAGGCTTATGTTTATGACACGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCGTTGATTCAGAGAGGGAATCATTTACTGCTAAACTTCAGGAGGTAGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATACATTGCCAAGCTAGAAGAACTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAAGAATACATGGAGAGGGGTACAGTAATAGATCAACTTGTCTATTGTATAAATAGTTATAGAGAAGCTGCAATGTCAAATGATCCCAAATTCGATCACATTGACATCAATGAGAAACAAAAGGTCTTAAATGAATGTGTGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACAGCAACAGGACTCTCTTCCGAAATATGTCACCCCGGTACTTTTGTCAGCTGACATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCAATTATGATGAAACCAAAGCCACCACCACCCAAGCCAGCTACACCAGAAGCACCAGCAACCCCACCTCCTCAGGGTGGTGAGCAGCCACAGCAGCAGCAACAACAACCACCTGAGGAGAATCCTAATGCCAGTACTAATGAAAAGGCAGGGGACAATGCTAATCCAGCCCCACCACCAGCATCTGCTGAACCAATGGAGACTGACAAACCAGAGAACACAGGCTCTGCTTAA 2592 0.4201 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQRDLKTFPFVVTEGPDGYPLIHARYLGEARTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGPSSDAQESGPNNTQRTLVFPKGNPIPSVKALTIYRSGTFSIDVQYDDVSELQTPAKISTYTIGPFQSTITEKAKVKVKVRLNLHGIVSVESATLLEEEEIEVPVSKEPAGENTKMETDEAPANVAAPPSTNDNDVNMQDANSKATADAPGSENGTPEAGDKPVQMDTDTKVEAPKKKVKKINIPVVELVYGAMAAADVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDTRNKLNDKYQEFVVDSERESFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYMERGTVIDQLVYCINSYREAAMSNDPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYVTPVLLSADIRKKAEAVDRFCKPIMMKPKPPPPKPATPEAPATPPPQGGEQPQQQQQQPPEENPNASTNEKAGDNANPAPPPASAEPMETDKPENTGSA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00141 863 MobiDBLite consensus disorder prediction 529 554 - -
Gma15g00141 863 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 710 797 IPR029048 -
Gma15g00141 863 Gene3D - 38 113 - -
Gma15g00141 863 CDD HSPA4_like_NDB 2 381 - -
Gma15g00141 863 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 631 IPR029047 -
Gma15g00141 863 MobiDBLite consensus disorder prediction 785 863 - -
Gma15g00141 863 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gma15g00141 863 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gma15g00141 863 Gene3D - 186 360 - -
Gma15g00141 863 Coils Coil 684 704 - -
Gma15g00141 863 Gene3D - 598 707 IPR029048 -
Gma15g00141 863 MobiDBLite consensus disorder prediction 789 812 - -
Gma15g00141 863 MobiDBLite consensus disorder prediction 813 838 - -
Gma15g00141 863 Pfam Hsp70 protein 3 699 IPR013126 GO:0005524|GO:0140662
Gma15g00141 863 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 862 - -
Gma15g00141 863 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 596 IPR029047 -
Gma15g00141 863 PRINTS 70kDa heat shock protein signature 2 15 - -
Gma15g00141 863 PRINTS 70kDa heat shock protein signature 30 42 - -
Gma15g00141 863 PRINTS 70kDa heat shock protein signature 140 160 - -
Gma15g00141 863 PRINTS 70kDa heat shock protein signature 332 348 - -
Gma15g00141 863 PRINTS 70kDa heat shock protein signature 363 383 - -
Gma15g00141 863 Gene3D - 5 374 - -
Gma15g00141 863 Gene3D Actin; Chain A, domain 4 230 313 - -
Gma15g00141 863 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 601 698 IPR029048 -
Gma15g00141 863 MobiDBLite consensus disorder prediction 505 579 - -
Gma15g00141 863 PANTHER HSC70CB, ISOFORM G-RELATED 1 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00141 Gma-Chr15 1170995 1176511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00141 4 405 Calmodulin-binding Proteins AT1G16030 36.790 4.39e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00141 K09489 - gmx:100778196 1613.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00141 15 1170995 1176511 Gma15g00141 15 1170995 1176511 ECH
Gma13g03214 13 46235965 46239655 Gma15g00141 15 1170995 1176511 GST
Gma15g00141 15 1170995 1176511 Gma07g00056 07 456493 463541 PCT
Gma15g00141 15 1170995 1176511 Gma08g01894 08 17012537 17019795 PCT
Gma07g00056 07 456493 463541 Gma15g00141 15 1170995 1176511 PCT
Gma08g01894 08 17012537 17019795 Gma15g00141 15 1170995 1176511 PCT