Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00137 ATGGATGGCATTGAGGATGATGCAAGGTATCCCCATAACCCATATGGTTATGGTTATCAGAATTCTCCATATTCCCCCCCagttgatactgaatatgcccatgatgataatgatgaaaatgaacaagaacagttagaaggggatgatgaggttgatgttgatcaaagtaacaatcttcagcttccccaagaggatgctgttgatgaagatggcatgtatgggggtggtgatgaaaatgatgataaccatgatgatgatgatgatgatgatgaggaggaggaggaggaggaggaggaggaggTGGAAGAGAATAAGCAGATTGATTATTATGCCATTAAGAGTGAAGATGAGTTAGAGTGGCACCCAAAAAAGCAAAAGCTAAAGAGTTTGATTTCGACCTATGAACTCGCACCTCGAGTGCCAGCACCATCATCAGTTGCAGCTACTGCTCCCACGGTTCCTAAACCATCTTCTGGGGGTAGGAATTCACTAACTGACTGGACTGAGCAAGAGACTTTTGTTCTTCTTGATGCATGGGGTGATAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATGTGAGGAATGGCAACAAGTTGCAAAAATGGTATCACAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGAAATCGTCTAGATACATTGAAGAAAAAATACAAGAAGGAGAAGGCTAAATTTCCAGATAGTGATGGTGGAGCTTGCAAATGGGTTTATTTAAAAAGGATGGATGAGCTAATGTCTTCTCCTCCGCAACAAGCTGGTCTCTCTTGTGGTTTAGACTCAGGAGAGTATGTTTTTATGAACACCAGAGTTCATTTGAACCATGCAAATGGGTTGGATGAAATGAAGGATAATCCTGACAATACAGAATCTACTGGCGAAGAAGATTCTGATGGGCCTCAAGCAAAGAAAAGAAAGAAGAGAAGGGGCAGTGGCGAAGCTTCTTCTTTCAGGTTACTTGCTGATTCCATTCAGAAATTCAGTAAGATATATGAGAAGATAGAAAATAGTAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGAAGGATTTCCATAAAGAGTTGGAAAGGCAGAAGAGGCAGATTTTAGAGAATCTGCAGTGTGAGATTTCAAAACTAGAGCAGAGAAATGATGAGAACAATGATTCTGCCGAAAATGGTACTTGA 1194 0.3325 MDGIEDDARYPHNPYGYGYQNSPYSPPVDTEYAHDDNDENEQEQLEGDDEVDVDQSNNLQLPQEDAVDEDGMYGGGDENDDNHDDDDDDDEEEEEEEEEEVEENKQIDYYAIKSEDELEWHPKKQKLKSLISTYELAPRVPAPSSVAATAPTVPKPSSGGRNSLTDWTEQETFVLLDAWGDRFLQHGRKSLRCEEWQQVAKMVSQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDSDGGACKWVYLKRMDELMSSPPQQAGLSCGLDSGEYVFMNTRVHLNHANGLDEMKDNPDNTESTGEEDSDGPQAKKRKKRRGSGEASSFRLLADSIQKFSKIYEKIENSKRQQMVELEKMRKDFHKELERQKRQILENLQCEISKLEQRNDENNDSAENGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00137 397 MobiDBLite consensus disorder prediction 285 323 - -
Gma15g00137 397 MobiDBLite consensus disorder prediction 145 164 - -
Gma15g00137 397 Gene3D - 167 229 - -
Gma15g00137 397 MobiDBLite consensus disorder prediction 285 311 - -
Gma15g00137 397 Coils Coil 339 392 - -
Gma15g00137 397 MobiDBLite consensus disorder prediction 1 110 - -
Gma15g00137 397 ProSiteProfiles Myb-like domain profile. 167 224 IPR001005 -
Gma15g00137 397 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 69 395 IPR044823 -
Gma15g00137 397 MobiDBLite consensus disorder prediction 70 104 - -
Gma15g00137 397 Pfam Myb/SANT-like DNA-binding domain 166 253 IPR044822 -
Gma15g00137 397 PANTHER OS01G0718900 PROTEIN 69 395 - -
Gma15g00137 397 MobiDBLite consensus disorder prediction 150 164 - -
Gma15g00137 397 MobiDBLite consensus disorder prediction 34 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00137 Gma-Chr15 1163645 1164838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00137 313 395 Trihelix Transcription Factor Family AT3G14180 40.964 1.85e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma15g00137 Myb_DNA-bind_4 2.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00137 - - gmx:100779629 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00137 15 1163645 1164838 Gma15g00137 15 1163645 1164838 ECH
Gma13g03217 13 46248183 46249997 Gma15g00137 15 1163645 1164838 GST