Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00135 ATGGGTGTGAACTCCAACAGAGTGGAACACTTTGATAGCCATGAAAGCACCATCAAAATCCAGGACGAGACAATGCAAATCCATGCAGTGCAGTTGCCACCACACCGAACCACACTCCACAAACTCAGACAAAGAGTCTCTGAAATCTTCTTCCCTGATGACCCTCTCTACCGTTTCAAGAACCAAACTTGCTTCAAAAAGTTCCTCCTCGCACTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCAAACTACAATCTCACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTTCCAGCCTCGCCATTCCTCAGGGAATCAGTTATGCGAAGCTTGCCAACTTGCCACCTATTATTGGATTGTATTCGAGTTTTGTGCCCCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGGCCTGTTTCCATTGCCTCTTTGGTTATGGGATCAATGTTAAGTGAGAAAATTTCTTACACTCAAGAACCTATTCTCTATCTGGGATTGGCTTTCACCGCCACTTTCTTTGCTGGTGTATTCCAAGCTTCTCTCGGTATATTAAGGTTAGGCTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACAGGCGGTGCTGCCGTTATTGTGTCACTGCAGCAGCTGAAAGGGTTACTTGGAATTGTGCACTTTACCAGCAAGATGCAAATAATTCCTGTTATGATCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACCATTCTTCTGGGATTCGGCTTCTTGGTCTTCTTGCTGACAACAAGACACATTAGCTTGAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCGACCATTTTAGTCTTTCTTCTGAGAAATACGACTCATCAAATTTCAGTTATTGGGCACTTACCAAAGGGAGTTAATCCACCATCAGCAAACATGCTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATTACAGGGATCTTATCTCTTACTGAAGGAATTGCAGTAGGTAGAACATTTGCTTCACTTAAAAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACCCTCCTGTTTCTCATGCCTCTGTTCTACTATACACCAAATGTTGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGTCTAATAGATTATCAATCTGCATACAAATTATGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTATCATATCAGTCTTCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCACAACATAAACCAATACATAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATTCTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCTAATAATGGAGCTCCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGGCTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAGCGATCACTTGAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAATTGCATAAGTCAAATATTTTGGATTCTTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCAATCTGGAAAGCTCAGCCTTGA 1959 0.4216 MGVNSNRVEHFDSHESTIKIQDETMQIHAVQLPPHRTTLHKLRQRVSEIFFPDDPLYRFKNQTCFKKFLLALQYLFPIFQWAPNYNLTLLRSDLISGLTISSLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEKISYTQEPILYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAVIVSLQQLKGLLGIVHFTSKMQIIPVMISVFKQRHEWSWQTILLGFGFLVFLLTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNTTHQISVIGHLPKGVNPPSANMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVIISVFKILLHVTRPNTLVLGNIPGTQIFHNINQYIEALRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGAPLKCIILDMTAVTAIDTSGLDTLCELRKMLEKRSLELVLANPVGNVMEKLHKSNILDSFGLKGVYLTVGEAVADISSIWKAQP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00135 652 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Gma15g00135 652 SUPERFAMILY SpoIIaa-like 522 643 IPR036513 -
Gma15g00135 652 Pfam Sulfate permease family 90 469 IPR011547 GO:0016021
Gma15g00135 652 Gene3D STAS domain 501 646 IPR036513 -
Gma15g00135 652 TIGRFAM sulP: sulfate permease 77 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma15g00135 652 Pfam STAS domain 522 640 IPR002645 -
Gma15g00135 652 PANTHER SULFATE TRANSPORTER 16 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma15g00135 652 ProSiteProfiles STAS domain profile. 521 644 IPR002645 -
Gma15g00135 652 CDD STAS_SulP_like_sulfate_transporter 522 637 - -
Gma15g00135 652 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00135 Gma-Chr15 1151275 1156648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00135 1 652 Inorganic Solute Cotransporters AT3G15990 76.300 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00135 K17471 - gmx:100812617 1262.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00135 15 1151275 1156648 Gma15g00135 15 1151275 1156648 ECH
Gma13g03219 13 46258547 46263695 Gma15g00135 15 1151275 1156648 GST
Gma15g00135 15 1151275 1156648 Gma07g00058 07 467313 471386 PCT
Gma15g00135 15 1151275 1156648 Gma08g01896 08 17023808 17027750 PCT
Gma07g00058 07 467313 471386 Gma15g00135 15 1151275 1156648 PCT
Gma08g01896 08 17023808 17027750 Gma15g00135 15 1151275 1156648 PCT