Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00125 ATGGAGAAAGAAGGTGTTGGGCTTGAAATCACTACTGAGCTAAGGTTGGGCCTTCCCGGTGGGGAATTACCTGACAAGAACGAGAAGATGAAGAAGAGGGTGTTCTCGGAGATTAATCAAGGTGATGAAAACAGCTCCTCCGAAGAAGATCGCAAAATCCAAACCAAAAACCAAGTGGTTGGGTGGCCTCCGGTGTGTTCGTACCGCAAGAAGAACACCATCAATGAAACCAAAATGTACGTCAAAGTTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATTGATTTGGCTATGCACAAGGGATATTCGGAGCTAGCCTTGGCCTTGGAGAAGTTCTTCGGTTGCTATGGAATTGGCTCAGCGTTGAAGGATGAGGAGAATGTTGAACAAGTTCCCATATACGAGGACAAAGATGGTGACTGGATGCTCGTTGGAGATGTTCCTTGGGAGATGTTTATTGAGTCATGCAAGAGGTTGAGGATTATGAAGAGATCAGATGCAAAGGGCTTCGATCTGCAACCAAAAGGGTCTTTAAAGGGATTTATAGAAGGCGTGACAAAATGA 564 0.4557 MEKEGVGLEITTELRLGLPGGELPDKNEKMKKRVFSEINQGDENSSSEEDRKIQTKNQVVGWPPVCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMHKGYSELALALEKFFGCYGIGSALKDEENVEQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVTK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00125 187 Gene3D - 72 175 - -
Gma15g00125 187 SUPERFAMILY CAD & PB1 domains 72 163 - -
Gma15g00125 187 ProSiteProfiles PB1 domain profile. 78 166 IPR000270 GO:0005515
Gma15g00125 187 Pfam AUX/IAA family 32 170 IPR033389 -
Gma15g00125 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 170 - -
Gma15g00125 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 170 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00125 Gma-Chr15 1028229 1031442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00125 75 185 B3 DNA Binding Superfamily AT4G23980 35.135 9.38e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma15g00125 AUX_IAA 3e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00125 K14484 - gmx:100811879 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00125 15 1028229 1031442 Gma15g00125 15 1028229 1031442 ECH
Gma13g03230 13 46377503 46380731 Gma15g00125 15 1028229 1031442 GST
Gma07g00321 07 2740780 2744540 Gma15g00125 15 1028229 1031442 PCT
Gma08g01903 08 17114767 17118209 Gma15g00125 15 1028229 1031442 PCT