Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00124 ATGTCCTCCGAATCACACGCCGTTGATTGTAACTTGAAGGAGACGGAGCTCACCTTAGGCCTTCCCGGCACCAAAACTACTGCCACAAAACGTGGCTTCTCTGATACCCTTCCTCCTTCTCAAAATAAAATCTTGCGCCCCACCTCCAAATTCCCAACACCCAAGGAACAACTGGTGGGGTGGCCGCCGGTGAGGGCAAGCAGGAAGAATGCTATGAAGAGCTGTTGCAAGTTGGTGAAGGTGGCGGTGGATGGAGCTCCTTATCTAAGAAAAGTGGATCTTGACATGTACGATAGTTATGAGCATTTGATGAGGGAATTAGAGACAATGTTTTGTGGCTTAGCCATTCgtaatcatttgatgaatgagaggaaactgatggatcctggaaatgggATTGAATACATGCCCACCTATGAGGACAAAGATGGTGACTGGATGTTGGTCGGGGATGTACCCTGGAAAATGTTTGTTGAATCATGCAAGAGGATAAGACTTATGATTAGCTCAGAGGCCGTTGGTTTAGGTCCGAGGTCTACTTCTTCAAAATGTACGGGTTCCACTTAG 567 0.4356 MSSESHAVDCNLKETELTLGLPGTKTTATKRGFSDTLPPSQNKILRPTSKFPTPKEQLVGWPPVRASRKNAMKSCCKLVKVAVDGAPYLRKVDLDMYDSYEHLMRELETMFCGLAIRNHLMNERKLMDPGNGIEYMPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMISSEAVGLGPRSTSSKCTGST 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00124 188 MobiDBLite consensus disorder prediction 21 57 - -
Gma15g00124 188 ProSiteProfiles PB1 domain profile. 76 171 IPR000270 GO:0005515
Gma15g00124 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 4 173 - -
Gma15g00124 188 Pfam AUX/IAA family 27 178 IPR033389 -
Gma15g00124 188 Gene3D - 71 181 - -
Gma15g00124 188 MobiDBLite consensus disorder prediction 21 48 - -
Gma15g00124 188 SUPERFAMILY CAD & PB1 domains 69 168 - -
Gma15g00124 188 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 173 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00124 Gma-Chr15 1018531 1019720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00124 63 172 B3 DNA Binding Superfamily AT3G61830 30.909 1.13e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma15g00124 AUX_IAA 1.5e-50 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00124 K14484 - gmx:100815098 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00124 15 1018531 1019720 Gma15g00124 15 1018531 1019720 ECH
Gma13g03231 13 46390468 46392080 Gma15g00124 15 1018531 1019720 GST