Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00086 atgacacaaattctactgcatgggaccctccaagtcacaatctatgagctggataacctcaaggctggaagtggtggtaatattttaaccaagTTGGTACATAACATCGAAGAGACTATTGGTATTGGGAAAGGAATTACTAAACTATATGCAACCATTGATCTAGAGAAGGCACGGGTGGGAAGAACCAGAATCATAGAAAAGGAGCACACAAATCCTAAATGGTACGAGTCTTTCCACATTTATTGTGCTCATATGGCATCAAGTATTATATTCACAGTGAAAGATGACAATCCTATTGGTGCAACCTTAATTGGAAGAGCATATAGACAAGGGTGTAAGGTTTCTCTGTACCAAGATGCTCATGTCCCAGACAACTTTGTCCCTAAAATACCACTTGCTGGAGGCCACACTTACCAACCTCATAGATGTTGGGAAGATGTTTTTGATGCAATCAATAACGCACAACACTTGATATACATTGCAGGATGGTCTGTTTACACTGAGATTACGTTGGTAAGAGATTCTAGGAGGCCAAAGCGTAGGAGATGCAACACTTGGGTTTTGATGCTTGTTTGGGATGATAGAACTTCGGTTCCTTTGTTAAAAGAAGATGGCTTGATGGCAACTCATGATGAAGACACCGAGAACTACTTCTACGACAGTGAAGTGCACTGTGTTTTATGCCCTCGAAATCCTGACGATGGAGGAAGCGTTGTTCAGGACGTAGAAATTTTCTCCATGTTTAGTCATCATCAGAAAATTGTGGTAGTGGACAGTGCTTTGCCGAATGGAAGATCAGATAAAAGAAGAATTGTGAGTTTTGTTGGGGGTATTGATTTTTGTGATGGAAGATATGACACTCAATTTCACTCACTTTTTAGAACCTTGGGCACTGTACATCATGATGATTTTCATCAGCCTAATTTTTCACATACTTCAATAAAGAAAGGTGGTCCAAGGGAGCCATGGCATGACATTCACTCTCGGCTTGAAGGGCCTATTGCATGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAAGAAGCAAGGTGGAAAGGACTTACTTATTCCACCTAAAGATCTTGAAAATGTCATTATTCCCCCATCAGTAGTAACTTACCCTGAAGACCATGAGGCATGGAACGTTCAGTTATTTAGATCCATTGATGGTGGAGCTGCTTTTGGGTTCCCAGAGACTCCTGAGGAAGCAGCTAGATCTGGACTCATTAGTGGGAAGGATAATATAATAGACCGTGGCATTCAAGATGCTTATATTAAAGCCATTCGACGTGCCAAAAATTTCATCTATATTGAGAATCAGTACTTTCTTGGAAGTTGTTATGCTTGGAGTGCTGATGGGATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATACCGAGGGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCAGTGTTTATATTGTGGTTCCAATGTGGCCAGAGGGTTACCCAGAAAAAGGAACGGTTCAAGCAATATTGGATTGGCAGAGGAGAACAATGGATATGATGTACAAGGATGTTGTTGGAGCACTAAAAGGCAAGGGTATTGAGGAAGATCCTCTCAACTATTTGACATTCTTCTGCCTCGTTAATAGGGAGCTGAAGAAAGAAGGAGAGTATGTGCCCCCAGAAAGACCAGATCCTCATACAGATTATATGAGAGCACAAGTGTCCCGACGCTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATAAACCAGAGATCAATGGATGGTGCGAGAGACTCTGAGGTGGCGATGGGTGCTTATCAACCCTATCATTTGGCTACCAAGCAGCCAGCAAGGGGACAAATCCACGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGCTTGCTTCATGACTCCTTCCTCCATCCTGAGAGTGAAGAATGTATTGAGAAGGTTAACCAGATTGCAGACAAGTATTGGGATCTCTATACTACTGAGCCACTTGAGCAAGACCTTCCTGGCCATCTGCTTCGCTACCCTGTTGCGATTTCCAGCCAAGGAAATGTGACACAACTGCAAGCATTTGAATTCTTCCCTGACACAAAAGCTCCTATTCTTGGGGCTAAATCTGACTACATTCCACCTATCCTTACTACTTAA 2190 0.4041 MTQILLHGTLQVTIYELDNLKAGSGGNILTKLVHNIEETIGIGKGITKLYATIDLEKARVGRTRIIEKEHTNPKWYESFHIYCAHMASSIIFTVKDDNPIGATLIGRAYRQGCKVSLYQDAHVPDNFVPKIPLAGGHTYQPHRCWEDVFDAINNAQHLIYIAGWSVYTEITLVRDSRRPKRRRCNTWVLMLVWDDRTSVPLLKEDGLMATHDEDTENYFYDSEVHCVLCPRNPDDGGSVVQDVEIFSMFSHHQKIVVVDSALPNGRSDKRRIVSFVGGIDFCDGRYDTQFHSLFRTLGTVHHDDFHQPNFSHTSIKKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDLLIPPKDLENVIIPPSVVTYPEDHEAWNVQLFRSIDGGAAFGFPETPEEAARSGLISGKDNIIDRGIQDAYIKAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPRELSLKIVSKIEAGERFSVYIVVPMWPEGYPEKGTVQAILDWQRRTMDMMYKDVVGALKGKGIEEDPLNYLTFFCLVNRELKKEGEYVPPERPDPHTDYMRAQVSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEVAMGAYQPYHLATKQPARGQIHGFRMSLWYEHLGLLHDSFLHPESEECIEKVNQIADKYWDLYTTEPLEQDLPGHLLRYPVAISSQGNVTQLQAFEFFPDTKAPILGAKSDYIPPILTT 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00086 729 PANTHER PHOSPHOLIPASE D 109 729 - -
Gma15g00086 729 PANTHER PHOSPHOLIPASE D 2 109 - -
Gma15g00086 729 Pfam Phospholipase D Active site motif 248 285 IPR001736 GO:0003824
Gma15g00086 729 Pfam Phospholipase D Active site motif 576 602 IPR001736 GO:0003824
Gma15g00086 729 PANTHER PHOSPHOLIPASE D 109 729 IPR015679 -
Gma15g00086 729 PANTHER PHOSPHOLIPASE D 2 109 IPR015679 -
Gma15g00086 729 ProSiteProfiles C2 domain profile. 1 127 IPR000008 -
Gma15g00086 729 SMART pld_4 247 285 IPR001736 GO:0003824
Gma15g00086 729 SMART pld_4 575 602 IPR001736 GO:0003824
Gma15g00086 729 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 116 IPR035892 -
Gma15g00086 729 Pfam Phospholipase D C terminal 648 719 IPR024632 -
Gma15g00086 729 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 247 285 IPR001736 GO:0003824
Gma15g00086 729 PIRSF PLD_plant 1 109 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gma15g00086 729 PIRSF PLD_plant 107 729 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gma15g00086 729 Gene3D Endonuclease Chain A 403 622 - -
Gma15g00086 729 SUPERFAMILY Phospholipase D/nuclease 109 367 - -
Gma15g00086 729 Gene3D Endonuclease Chain A 134 364 - -
Gma15g00086 729 SUPERFAMILY Phospholipase D/nuclease 404 659 - -
Gma15g00086 729 Pfam C2 domain 8 109 IPR000008 -
Gma15g00086 729 SMART C2_3c 9 125 IPR000008 -
Gma15g00086 729 Gene3D C2 domain 4 126 IPR035892 -
Gma15g00086 729 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 575 602 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00086 Gma-Chr15 691471 696635 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00086 110 729 Phospholipase D Gene Family (Wang group) AT3G15730 75.394 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00086 K01115 - qsu:112037256 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03268 13 46678775 46684501 Gma15g00086 15 691471 696635 ECH
Gma15g00086 15 691471 696635 Gma15g00086 15 691471 696635 ECH
Gma13g03268 13 46678775 46684501 Gma15g00086 15 691471 696635 GST