Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00085 ATGTTTCTATTGTACATGTCTTCAGTTGTTCGCCGGCAATACGATGTCATTCTACCTCCCAGTTTTGAGTTCCTCAACTGCGTGAAAAAGTGCTTCTACCTCGACCTACAGAGAATGCTCTCCTGGTTCAACGCTGTACAAACTCAGAGCTATATCACTTGGTTTTCTGACTCTCAGGAAGCACTGCTAATGCTGTTGTCAAGAGGAGTATTGAATAGTCTCTTAGTGGAAAGTCAGGTAACAAaggtgatggcacaaattctactgcatgggacccttcaagccaaaatctatgaggtggataacctcaaggttggaagtgttggtaatgttttaaccaagTCGGTACATAACATCGAGGAGACTAATGGTATTGGGAAAGGAATCACTAAGCTTTATGCAACCGTTGATTTAGAAAAGGCACGCGTGGGAAGGACTAGAATTATAGAAAAGGAGCACACAAATCCTAAAGGGAACGAGTCCTTCCACATTTATTGTGCTCATATGGCATCAAATATCATATTCACAGTGAAAGATGACAATCCTATTGGTGCAACCTTAATTGGAAGTGCATATGTCCCCGTTGAGGAGATCTTGGATGGCAAAGAAATAGACAACTTTGTACCTAAAATACCACTTGCTGGAGGCCACACTTACCAACCTCATAGATGTTGGGAAGATGTTTTTTATGCAATCAATAACGCACGACACTTGATATACATTCTAGGGTGGTTTGTTTACACTGAGATTACGTTGGTAAGAAATTCTACAAGGCCAAAGCCTGGAGGAGATAATGTAACACTTGGTGAGCTTCTCAAGAAAAAAGCAAGAGAAGGTGTAAGGGTTTTAATGCTTCTCTGGGATGATAGTGTAAATGCCATTCGACGAGCGAAAGATTTCATCTATATTGAGAATCAATATTTCCTCGGAAGCAGTTATGATTGGAGTGCTGATGGCATTAAGCCTGAAGCCATCGGTGCTTTGCATATAATCCCGAAGGAGCTTTGA 1008 0.372 MFLLYMSSVVRRQYDVILPPSFEFLNCVKKCFYLDLQRMLSWFNAVQTQSYITWFSDSQEALLMLLSRGVLNSLLVESQVTKVMAQILLHGTLQAKIYEVDNLKVGSVGNVLTKSVHNIEETNGIGKGITKLYATVDLEKARVGRTRIIEKEHTNPKGNESFHIYCAHMASNIIFTVKDDNPIGATLIGSAYVPVEEILDGKEIDNFVPKIPLAGGHTYQPHRCWEDVFYAINNARHLIYILGWFVYTEITLVRNSTRPKPGGDNVTLGELLKKKAREGVRVLMLLWDDSVNAIRRAKDFIYIENQYFLGSSYDWSADGIKPEAIGALHIIPKEL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00085 335 CDD C2_plant_PLD 85 217 - -
Gma15g00085 335 ProSiteProfiles C2 domain profile. 74 208 IPR000008 -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D ALPHA 1 205 290 - -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D ALPHA 1 291 335 - -
Gma15g00085 335 SUPERFAMILY Phospholipase D/nuclease 203 289 - -
Gma15g00085 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 89 208 IPR035892 -
Gma15g00085 335 Pfam C2 domain 92 208 IPR000008 -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D ALPHA 1 85 208 - -
Gma15g00085 335 SMART C2_3c 92 207 IPR000008 -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D 205 290 IPR015679 -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D 291 335 IPR015679 -
Gma15g00085 335 Gene3D C2 domain 71 217 IPR035892 -
Gma15g00085 335 PANTHER PHOSPHOLIPASE D 85 208 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00085 Gma-Chr15 687456 691241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00085 288 335 Phospholipase D Gene Family (Wang group) AT3G15730 75.000 3.47e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00085 K01115 - fve:101295265 205.297