LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00078	ATGGGCATATTCAGATGTGGGGCCTTGTTTTTCTATGTGCTCCTTTTGTTTAGAACCTGCCTGGCCAAAGATCAACATGTTAGTCAGATATATCCTGGCTTCAGTGCATCTCAGCCAGATTGGAGCGACCATAATGGTTTTTTCTTGCTATCCAACAGCTCGGCGTTCGCTTTTGGGTTCTTCACCACTCTTGATGTTTCATCGTTTGTTCTAGTTGTCATGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTGGGACTTCTGATAAATTTGTGCTTGACCGTGATGGGAATGCATATTTGGAAGGTGGGAATAGTGTAGTATGGGCAACAAATACAACAGGACAAAAAATAAGATCTATGGAGTTGCTTGACTCAGGGAATTTGGTGTTGCTTGGGGAAAATGGGACAGCTATTTGGCAAAGTTTTAGCCATCCCACTGATACTCTTTTGCCCAGACAAGACTTTGTGGATGGAATGACGCTCAAAAGCTTCCACAACAGCTTGAACATGTGTCATTTTCTTAGTTACAAGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGGAGAACAAGCTCAGGGAAGCTCAAGAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATTGAGTTTTTATGACATAAATAGAGCTTTGCTGTGGAAAGTTGTCTTCTCTGAGCACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGATCCAACTGGTGCAATCACTTTTTATGATCTTAACAAAGGGAGGGCTCCAAACCCTGAGGCAGTTAAGGTACCACAAGACCCTTGTGGCATTCCTCAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCATCTGTCCCAAACTTCTCAGAACTCGCTTTAATTGCAAACCTCCCAACATCTCCACCTGTTCTAGGAGTTCAACAGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTACACTGCTCCGGTTTCAAAATCAAACCTGAATGCTTGCAAAGAGACTTGTTTAGGAAACTGTTCATGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTATAAGAGGGGTGCCGGTGCCGGTGGTTATGTTTCGTTCATGAAGGTCTCCATTAGTAGTGCTAGTGATGATGGACATGGCAACAAAAATAGAAGGAATGACGCGGTGCTAGTTGTTGTCATAGTAGTTCTCACAGTTCTGGTTATAGTTGGTCTTATAATGGGATTCTGGTACTTTTACAAGAGGAAGAAGAATGTTGCTAAGTATCCTCAAGACGACTTGGATGAAGATGATGATTTCTTGGACAGTCTCTCTGGGATGCCCGCACGTTTTACTTTTGCTGCTCtttgtagagcaactaaggacttttccacaaaaattggggaaggaggttttggctcagtgtatctaggtgtgcttgaagatggcatccagttggctgtgaaaaaattggaaggtgttggacaaggtgcaaaagagtttaaagcagaagtgtccataattggaagtattcatcatgttcatcttgtcaagctcaaagggttctgtgccgagggtcctcatcgccttcttgtctatgaatacatggcaaggggttctttggacaaatggatcttcaagaacagtgacaacaccttcttgttgaactgggacacgaggtacaacattgcaataggcacggctaagggattggcctatctccatgaggagtgtgaagtgaggattatccactgtgatattaagccgcaaaatgttcttcttgatgataacttcactgctaaggtttcagattttggattggctaagctaatgagccgtgagcagagccatgtgttcacaactctaaggggtacaaggggttatctagcaccagaatggataactaactatgcaatttcggagaagagtgatgtgttcagctatggcatgctattgcttgagatagttggagggaggaagaactatgatcaatgggaaggggcagaaaaagcgcattttccttcttatgtgttcagaatgatggatgaagggaaactgaaagaggttcttgatccaaagatagatattgatgagaaggatgaaagggttgaggctgctcttaaagttgctctttggtgcatacaagatgacgtgagtttgaggccttccatgactaaggtagctcagatgcttgatggtttGTGCCCTGTACCTGATCCCCCCTCATTATCTCAATCTGGTACTTATTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCTACTTCATCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCATGTGTTCAATTATCAGGACCAAGATGA	2445	0.2822	MGIFRCGALFFYVLLLFRTCLAKDQHVSQIYPGFSASQPDWSDHNGFFLLSNSSAFAFGFFTTLDVSSFVLVVMHLSSYKVVWTANRGLLVGTSDKFVLDRDGNAYLEGGNSVVWATNTTGQKIRSMELLDSGNLVLLGENGTAIWQSFSHPTDTLLPRQDFVDGMTLKSFHNSLNMCHFLSYKAGDLVLYAGFETPQVYWSLSGEQAQGSSRNNTGKVHSASLVSNSLSFYDINRALLWKVVFSEHSDPKSLWAATLDPTGAITFYDLNKGRAPNPEAVKVPQDPCGIPQPCDPYYVCFFENWCICPKLLRTRFNCKPPNISTCSRSSTELLYVGEELDYFALKYTAPVSKSNLNACKETCLGNCSCLVLFFENSTGRCFHFDQTGSFQRYKRGAGAGGYVSFMKVSISSASDDGHGNKNRRNDAVLVVVIVVLTVLVIVGLIMGFWYFYKRKKNVAKYPQDDLDEDDDFLDSLSGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGVLEDGIQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSDNTFLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIVGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDPKIDIDEKDERVEAALKVALWCIQDDVSLRPSMTKVAQMLDGLCPVPDPPSLSQSGTYSAFMKLSSGEATSSGQASFFSNVPMSCVQLSGPR	814

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g00078	814	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	2	814	-	-
	Gma15g00078	814	SMART	blect_4	40	152	IPR001480	-
	Gma15g00078	814	Gene3D	-	42	151	IPR036426	-
	Gma15g00078	814	ProSiteProfiles	Protein kinase domain profile.	492	765	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma15g00078	814	ProSiteProfiles	PAN/Apple domain profile.	325	396	IPR003609	-
	Gma15g00078	814	SUPERFAMILY	Protein kinase-like (PK-like)	476	762	IPR011009	-
	Gma15g00078	814	PIRSF	SRK	3	811	IPR024171	GO:0004674
	Gma15g00078	814	CDD	STKc_IRAK	498	765	-	-
	Gma15g00078	814	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5	2	814	-	-
	Gma15g00078	814	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	613	625	IPR008271	GO:0004672\|GO:0006468
	Gma15g00078	814	SMART	serkin_6	492	762	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma15g00078	814	SUPERFAMILY	alpha-D-mannose-specific plant lectins	78	203	IPR036426	-
	Gma15g00078	814	Gene3D	Transferase(Phosphotransferase) domain 1	567	765	-	-
	Gma15g00078	814	ProSiteProfiles	Bulb-type lectin domain profile.	34	150	IPR001480	-
	Gma15g00078	814	Gene3D	Phosphorylase Kinase; domain 1	463	566	-	-
	Gma15g00078	814	Pfam	Protein kinase domain	495	760	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma15g00078	814	CDD	B_lectin	45	152	IPR001480	-
	Gma15g00078	814	Pfam	D-mannose binding lectin	81	162	IPR001480	-
	Gma15g00078	814	ProSitePatterns	Protein kinases ATP-binding region signature.	498	521	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00078	Gma-Chr15	656600	659548	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00078	433	772	Receptor kinase-like Gene Family	AT5G20050	44.290	5.79e-91	292

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gma15g00078		Pkinase	4.3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00078	-		-	gmx:100816004	1606.27

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma13g03273	13	46711406	46713859	Gma15g00078	15	656600	659548	ECH
	Gma15g00078	15	656600	659548	Gma15g00078	15	656600	659548	ECH
	Gma15g00078	15	656600	659548	Gma14g01096	14	14679902	14682334	ECH
	Gma15g00078	15	656600	659548	Gma17g02011	17	36066057	36068495	ECH
	Gma15g00078	15	656600	659548	Gma04g00618	04	5653411	5658391	ECH
	Gma15g00078	15	656600	659548	Gma06g00603	06	5466232	5468685	ECH
	Gma13g03273	13	46711406	46713859	Gma15g00078	15	656600	659548	GST