LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00059	ATGTCTCACAGAAAGGATACCAACAATTATTCTTCCTTACCCATTAGCTCGTATCTAGAATTGCAGCCTCAAAATGATTCCTCAAAATCCTTACAAAGGCCTACTTTTGACGAATCCGAGGTGTATTTGGGATCCAAGGTCGATCACGACGACGATGACGATTTGGAAATCGACATCGATAATCATCCCCTTGTCGTTATGGGGCCCAATCACGGTTCTGGGATACCTGGTGCTGTTTTCAATTTAACAACCACTGTTATTGGGGCAGGGATTATGGCCCTCCCTGCCACTATGAAAGTTCTAGGAGTGGTTTTGGGGATTGTTTTGATCATTATTATGGGAATTTTGTCTGAAATTAGCGTCGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCATCCTCCTATGGGGAGGTTGTTCAACATGCTATGGGAAGGCCTGCCAGGATTTTGTCAGAAATTTGTATTATTGTCAACAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATAGGGGATGTTATGTCTGGTTCCGTTCACCATTTGGGGGTTTTTGATCAGTTAATGGGGAACGGGGTGTGGGATCAGAGGAAGCTTGTCATTTTTGTTGTCATGGTGGTTTTCCTTGCCCCCCTTTGTTCACTTGACAAGATTGATTCGTTGAGCTTGACTTCGGCCGCCTCAGTGGCTCTTGCTATCTTGTTTGTCCTTGTCACTTTTACTGTTGCTTTCATCAAGCTCGTGGAAGGACGGATTGATGCTCCCAGGATGGCTCCTGATTTTAGCTCTAAAACTGCCATCTTGGATTTGCTTGTCGTGATTCCCATCATGACTAATGCATATGTTTGCCATTTTAATTTGCAGCCGATATATAACGAGCTTGAACAGCGGTCTCCTCAGAAGATGAACCGAGTTGGAAGGTACACCACAATTTTGTGCATCCTAGTTTATTCTTCCACTGCCATATCGGGTTACCTGCTCTTTGGGAAAGATACTGAGTCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGCTCAGCCTTGAACTATATTGTCCGGGTTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTAATTCATTTCTCACTACGCCAAACAGTGGATGCACTAGTGTTTGAAGGATCACCACCTCTATCAGAAAGTAGGAAGAGATCTCTGGGGTTGACTGTGGTTCTGTTGGTCCTCATATATATTGGCTCTACCATGATTCCAAGCATATGGACAGCTTTTAAGTTCACCGGGGCAACCACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTGCATTGAGATTAAGTCATCAGGGGGATTTAAGCTATGGGGAAAGGATTTTATCTTGGTTGATGTTAGTATTAGCTGTGACTGTTAGCATAGTAGGAGTTGTTGGCAATATCTATAGCCTTGAGAGTAAGTCTTAG	1458	0.428	MSHRKDTNNYSSLPISSYLELQPQNDSSKSLQRPTFDESEVYLGSKVDHDDDDDLEIDIDNHPLVVMGPNHGSGIPGAVFNLTTTVIGAGIMALPATMKVLGVVLGIVLIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPARILSEICIIVNNAGVLVVYLIIIGDVMSGSVHHLGVFDQLMGNGVWDQRKLVIFVVMVVFLAPLCSLDKIDSLSLTSAASVALAILFVLVTFTVAFIKLVEGRIDAPRMAPDFSSKTAILDLLVVIPIMTNAYVCHFNLQPIYNELEQRSPQKMNRVGRYTTILCILVYSSTAISGYLLFGKDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTVVLLVLIYIGSTMIPSIWTAFKFTGATTAVSLGFIFPSLVALRLSHQGDLSYGERILSWLMLVLAVTVSIVGVVGNIYSLESKS	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g00059	485	PANTHER	AMINO ACID TRANSPORTER AVT6E	47	484	-	-
	Gma15g00059	485	Pfam	Transmembrane amino acid transporter protein	73	476	IPR013057	-
	Gma15g00059	485	PANTHER	AMINO ACID TRANSPORTER	47	484	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00059	Gma-Chr15	519635	521092	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00059	8	485	Amino Acid or Auxin Permease AAAP Family	AT1G80510	72.222	0.0	668

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00059	-		-	gmx:100813328	890.567