Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00051 ATGGAGGAGAATCCATGGGGGAGTTGGTCTGCCGATATGGAAGTGGATGACGAGGTTGTGAATGAAAGTTTGTGCCACACGAACCTTTTTGATGAAGAGTTCCTAAGAGATATTCTGCAACGGCCACAAGAGGGTGCTCCAAATCTTAACAACTCATCCATCATGTCGTCTCTTTGTGCTCAAGACATTAAGCCAACTACCTTATTTCCAACCACTTACATACTCTCTTTCGACAATTCCGCTGCATTGTTACCAACAGAAACTGATCGTGATTTTTCTTCTTCCAAATTGCCCTCATCAAATTCAAGGGCCAACCATGGAATCAAGAAGCCTGGAAGCGCTTCGGAGTCACTGAATCACATCATGTCAGAGAGAAATAGGAGGCAGGAGCTCACCAGCAAATTCATTGCACTTGCTGCCACTATCCCTGGCTTGAAGAAGATGGACAAGGCCCATGTACTAAGAGAAGCTATCAATTACGTGAAACAACTACAAGAACGTGTAGAAGAGTTAGAAGAAGATATCCAGAAGAACGGTGTAGAATCAGAGATAACCATAACAAGATCTCATCTCTGCATTGATGATGGCACGAACACTGACGAATGCTATGGGCCCAATGAAGCACTTCCTGAAGTTGAAGCCAGAGTCTTAGGGAAGGAAGTGTTAATCAAAATTCACTGTGGCAAACATTATGGAATTCTGCTTGAAGTAATGTCTGAGCTCGAACGTCTTCATCTCTACATATCCGCTAGCAATGTCTTGCCTTTTGGGAATACCCTTGATATCACCATTATTGCTCAGATGGGTGACAAATACAACTTGGTAGCGAAGGATCTAGTGAAAGAACTGAGACAAGTGGCTATGATGAAGTCATGTTATGTGCAACAATGA 891 0.431 MEENPWGSWSADMEVDDEVVNESLCHTNLFDEEFLRDILQRPQEGAPNLNNSSIMSSLCAQDIKPTTLFPTTYILSFDNSAALLPTETDRDFSSSKLPSSNSRANHGIKKPGSASESLNHIMSERNRRQELTSKFIALAATIPGLKKMDKAHVLREAINYVKQLQERVEELEEDIQKNGVESEITITRSHLCIDDGTNTDECYGPNEALPEVEARVLGKEVLIKIHCGKHYGILLEVMSELERLHLYISASNVLPFGNTLDITIIAQMGDKYNLVAKDLVKELRQVAMMKSCYVQQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00051 296 MobiDBLite consensus disorder prediction 89 108 - -
Gma15g00051 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 164 IPR011598 GO:0046983
Gma15g00051 296 Pfam Helix-loop-helix DNA-binding domain 119 165 IPR011598 GO:0046983
Gma15g00051 296 PANTHER BHLH TRANSCRIPTION FACTOR 19 294 - -
Gma15g00051 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 181 IPR036638 GO:0046983
Gma15g00051 296 SMART finulus 121 170 IPR011598 GO:0046983
Gma15g00051 296 MobiDBLite consensus disorder prediction 89 116 - -
Gma15g00051 296 Coils Coil 154 181 - -
Gma15g00051 296 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 19 294 - -
Gma15g00051 296 Gene3D - 109 179 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00051 Gma-Chr15 459156 464418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00051 115 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.977 3.23e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00051 HLH 9.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00051 - - gmx:100809223 590.497