Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00050 ATGGACGATTGGTTATCTGATCAGGATATGGGCGGCGACAACTCCTTCTTCAGTGAAGAGCATCGAAATCCAACCTTGTACTGTGTTGCAAATGAAACAAGAAACCAGCTGCGAAGGAGCAAAGACACCGACACGGGATCACATTATGTCCGAGAGAAAAAGGAGACAGCTAATGGCAGAGATATTCATAGCGCTTTCAGCTATTATACCTGGCTCGAACAAGGAGAGGAATTTATTGTGCAGTTCGTTGGGAACCTACCCCTTGGGCAAGGTCTTCTTGGTGCTGGGGAAGACAGAATGGAGCAATCATATTCATGGGAGAATTGGGCTCTTGACAAGGAAATGGGGGAGGATGAGGAGGAGTTCCTTCGCGACATCCTTAGTAAACCGGCTTTTTCTTCCGAGAGTGAAAGTCAAGCACCAGTTGTCTCATGCTCTGCCAAAAGCAAAAGGGCTCCGATGACATACATTTTGTCTTTTGATAACTCCACCATAACACCAGCACCTTCTTCCCCCCCCACCCTAGAGGCCCAACCTGGAAAGAGGGCTAAAAGAGCTTCCCACATTATGGCTGAAAGAAAAAGGAGACAGCAACTCACCCAGAGCTTCATTGCACTTTCAGCCACCATCCCTGGCTTGAACAAGAAGGACAAGAGTTCTATGCTTGGCAAAGCAATTGATTACGTGAAACAACTTCAAGAACGCGTGACGGAGCTTGAACAGAGAAAGAAGAGAGGCAAAGAATCGATGATAATCCTCAAGAAGAGTGAAGCAAATTCTGAGGATTGCTGTAGAGCCAACAAAATGCTCCCTGATGTTGAAGCAAGAGTGACGGAGAATGAGGTACTCATTGAGATCCATTGCGAGAAGGAAGATGGGCTTGAGCTGATCAAAATATTGGACCACCTTGAAAATCTTCATCTCTGTGTCACCGCCAGCAGCGTATTGCCCTTTGGGAATTCAACTCTTAGCATCACTATTATCGCTCAGATGGGTGACGCGTACAAAATGAAGGTGAATGATCTAGTTAAAAAACTAAGGCAAGTGTTGTTGAATCACACGAACGTCAATACCAATCCGTACTAG 1086 0.4586 MDDWLSDQDMGGDNSFFSEEHRNPTLYCVANETRNQLRRSKDTDTGSHYVREKKETANGRDIHSAFSYYTWLEQGEEFIVQFVGNLPLGQGLLGAGEDRMEQSYSWENWALDKEMGEDEEEFLRDILSKPAFSSESESQAPVVSCSAKSKRAPMTYILSFDNSTITPAPSSPPTLEAQPGKRAKRASHIMAERKRRQQLTQSFIALSATIPGLNKKDKSSMLGKAIDYVKQLQERVTELEQRKKRGKESMIILKKSEANSEDCCRANKMLPDVEARVTENEVLIEIHCEKEDGLELIKILDHLENLHLCVTASSVLPFGNSTLSITIIAQMGDAYKMKVNDLVKKLRQVLLNHTNVNTNPY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00050 361 MobiDBLite consensus disorder prediction 163 183 - -
Gma15g00050 361 PANTHER BHLH TRANSCRIPTION FACTOR 105 356 - -
Gma15g00050 361 Gene3D - 177 248 IPR036638 GO:0046983
Gma15g00050 361 SMART finulus 189 238 IPR011598 GO:0046983
Gma15g00050 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 253 IPR036638 GO:0046983
Gma15g00050 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Gma15g00050 361 Pfam Helix-loop-helix DNA-binding domain 184 233 IPR011598 GO:0046983
Gma15g00050 361 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 105 356 - -
Gma15g00050 361 Coils Coil 222 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00050 Gma-Chr15 447609 454235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00050 174 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 47.396 2.91e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00050 HLH 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00050 - - gmx:100794354 510.375