Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00047 ATGGCTATTGGATCTGTTCCGTTCATTAATATGGGACTTTTTATTCATGATATCACGTCAGTGAGGAGTTTTACAATCAGCGGAATCACCTCGTTCCTCTTCATCGTCAATCTCTTTTCTGCATGGATCTTTGCTGGGCCATGGGTTTTCCAGAAGAACCTTTGTGACTTTGTCCATTTCTGCACTGCCGAAAATCGTTTCAAAATTGAACAAGAAAAGAAGGAAGCTTCTCTTGCCAACAAGTTATTCCACTCCCTCTCCTTGAATAAGGACACCCACCAGATGAATCTTCTTGTTCTGTTCCTGCCTATTTGGGTGTTAAGCATTTCTTTTTCCTCACCAACTCTTCTTGCTGCTTCCTCCATTTCTCTTTCTCAAAATGCACAAGCTGAATCTCCAGGAATTCAGGAGGTTAGAACAGTGCATCACCAGAATTTGAATAAGAGAATTCTAATCGCACTAGTTGCTTGTTCTACTCTTCTTGGTGGAGTCTTCCTATTCTTGTTATATGTCTGGTTCCGTCGACATAAAAACTTAAGATGCTCCAAAAGTATAAGCCAAGAAACCATTGAGACTGCAAAAGGGGAAACCATAAGCTCGGTTAATGCTAAACTGAACTACTCTAGGATGGCAGATAAAAGGAGTTCAGTTGCCATTTttgactatcagctgttagaggctgcaacaaacagctttagcacaagtaatattatgggtgagagtggttctagaattgtttacagagctcgttttgatgaacatttccaggcagctgtgaagaaagcagagagtgatgctgatagagaatttgagAATGAAGTGAGTTGGTTGAGCAAGATACGGcatcaaaatatcataaaacttatgggttattgtattcatggtgaatcgaggtttcttgtttatgaattgatggagaatggatctctggaAACTCAATTGCATGggcctaattgggggtcatctttaacttggcatctcaggttaagaattgctgttgacgttgccagagcattagaatatctccacgagcacaacaatcctcctgtggttcatagagacttaaaatgctctaatgttcttctggattctaactttaatgccaagttatcagattttggatttgctgtggtttcgggaatgcaacacaagaacattaagatgtcaggaactttaggatatgtggctcctgagtacatatcacatggtaaactaactgataagagcgatgtctatgcttttggggttgtccttctagaactcctaaccgggaaaaaacccatggagaacatgacctcgaaccaatatcaatcccttgtatcatgggccatgcctcagctaaccgacagatccaagcttcctagtattctggatcctgttatcagagacacaatggacttgaagcatttgtatcaggttgctgcagtggctgtactctgcgtgcaatcagaaccaagttataggccactaataacagatgtgttacactctcttatccctttggtacccgttgagcttggagggtcacttagagttacagaaCCAATCAGctcagagaactctcattga 1569 0.1848 MAIGSVPFINMGLFIHDITSVRSFTISGITSFLFIVNLFSAWIFAGPWVFQKNLCDFVHFCTAENRFKIEQEKKEASLANKLFHSLSLNKDTHQMNLLVLFLPIWVLSISFSSPTLLAASSISLSQNAQAESPGIQEVRTVHHQNLNKRILIALVACSTLLGGVFLFLLYVWFRRHKNLRCSKSISQETIETAKGETISSVNAKLNYSRMADKRSSVAIFDYQLLEAATNSFSTSNIMGESGSRIVYRARFDEHFQAAVKKAESDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNWGSSLTWHLRLRIAVDVARALEYLHEHNNPPVVHRDLKCSNVLLDSNFNAKLSDFGFAVVSGMQHKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMENMTSNQYQSLVSWAMPQLTDRSKLPSILDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENSH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00047 522 PANTHER RECEPTOR-LIKE KINASE 117 513 - -
Gma15g00047 522 Gene3D Transferase(Phosphotransferase) domain 1 305 503 - -
Gma15g00047 522 SUPERFAMILY Protein kinase-like (PK-like) 208 498 IPR011009 -
Gma15g00047 522 CDD STKc_IRAK 238 501 - -
Gma15g00047 522 PANTHER OS01G0253100 PROTEIN 117 513 IPR045271 GO:0004714|GO:0006468
Gma15g00047 522 Pfam Protein tyrosine and serine/threonine kinase 246 455 IPR001245 GO:0004672|GO:0006468
Gma15g00047 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Gma15g00047 522 Gene3D Phosphorylase Kinase; domain 1 192 304 - -
Gma15g00047 522 ProSiteProfiles Protein kinase domain profile. 232 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00047 522 SMART serkin_6 232 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00047 Gma-Chr15 412136 422119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00047 95 444 Receptor kinase-like Gene Family AT1G80640 47.154 1.32e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Gma15g00047 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00047 - - gmx:100811188 842.802