Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00034 ATGGATTATTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCTCCATAGGGTTCACGAAGAACTTCCCAAAAAGCAGGTGGAAAACAATTTTTTCTCATTGGATTTGGAGGTGAAGAAATCTTCTGTAAAACAAGAGTCAGCAGGTGCCTTGGCGGAGGAACTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTAACCGAAATGCTCACAGAGATGTGTGAGAACTACAACACTTTGCGAAGCAATTTGATGGAATACATGAGGAAGAATCCTGATAAGGAGCTCAGCTCATCAAGGAAAAGGAAGTCTGCAAGCAGCAACAACAATAGTACTATTCCAATGGGAGTCAACGGAACCTCTGAAAGCAGCTCAACCGATGAGGAATCCTGCAAGAATCCAAAGGAAGACATGAAGACAAAAATTTCAAGAGTTTATATGAGGACAGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACCAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATACACACCCTTCTCAAATGGAGGTAACAACAGGTTCCAACCGTTCAGTATCATGTTCAGCGTCTCTTAGCTCTTCCGCACCAACAGTTACCCTTGACTGGACAAAATCCAAGTCCAGCAGTGAGTCTAAGAATGTAAATCCCAAAACTGAATCACCAGAAGTCCCGCAGGTTTTGGTAGAACAGATGGCTACTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTAGTTGCCGCCATCTCTGGAAAAATGTTGCACAATAATAATTAA 921 0.4224 MDYSSWINTSLDLNINLHRVHEELPKKQVENNFFSLDLEVKKSSVKQESAGALAEELKRVSAENKKLTEMLTEMCENYNTLRSNLMEYMRKNPDKELSSSRKRKSASSNNNSTIPMGVNGTSESSSTDEESCKNPKEDMKTKISRVYMRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHTHPSQMEVTTGSNRSVSCSASLSSSAPTVTLDWTKSKSSSESKNVNPKTESPEVPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNNN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00034 306 MobiDBLite consensus disorder prediction 103 128 - -
Gma15g00034 306 SUPERFAMILY WRKY DNA-binding domain 156 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g00034 306 Gene3D WRKY domain 142 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g00034 306 Coils Coil 50 77 - -
Gma15g00034 306 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g00034 306 PANTHER TRANSCRIPTION FACTOR 1 305 - -
Gma15g00034 306 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g00034 306 MobiDBLite consensus disorder prediction 220 268 - -
Gma15g00034 306 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g00034 306 MobiDBLite consensus disorder prediction 93 140 - -
Gma15g00034 306 MobiDBLite consensus disorder prediction 218 272 - -
Gma15g00034 306 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 305 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00034 Gma-Chr15 292893 295096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00034 4 306 WRKY Transcription Factor Family AT1G80840 51.242 1.13e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g00034 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00034 - - gmx:732588 567.385