LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00029	ATGGCAGATCTCAAGGAGAGGCTACTAGCACCAAAACCTGCATCAGCTCTTAACGTAAGAGAGGTTTCCAATCGACCATCTGCCTCTGGAAGGCAAGCTTTCCAAGGGGTGGATGTTTTGGGGCTAAAGAAGCGGGGCCAAGGTCTCCGTTCATGGATTCGGGTCGACACATCTGGAAACTCTCAGGCTATTGAGGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCACGTGATCTTCGCCTACTTGATCCTCTGTTTGTCTACCCATCAACAATCCTTGGTAGGGAAAAAGCTATTGTTGTAAATCTAGAGCAGATACGGTGTATCATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTAATGGAACTGCAACGACGGTTGACAACAACTGGGGTAGGGGAGGTTTGGCAATCAGACAGTTCTGACATGAACCGAAGAAGAGGAAGTAGGAATTTTGAAAACGTATTTAGCAACTCTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCAGCATGCACATTTCTTGATTCCCAGGCAGCAGAGTTAGAAATAGAGGCTTATCCATTGTTGGATGAACTGACATCAAAGATCAGTACACTAAATTTAGAACGTGTTCGTCGGTTGAAGAGCAGACTTGTTGCCCTAACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGATATGGCCGAAATGTATCTTACTGAGAAGAAAAGGCGAATGGAGTTGTCATTTTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCTCCGGTCTCTCCTGTTTCATCACCTCCCGATTCTCGGAAGCTTGAAAAGAGCTTCAGCATTGCTAGGAGTCGACATGAGAGCATGAGGAGTTCTGAAAGTACTACGGAAAGTATAGAGGAGCTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGACACCGAAGATTTCATCAACATTCAACTGGATAATGTGCGAAATCAGCTTATTCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTTGCCATCTTTGGAGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCAATTATTTGATGTCCCCTCTGCTTTCCAGTGGGTCCTTATAATAACAGGAATTTGTGGAGTCTTTATATTTTCTGCATTTGTGTGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAG	1332	0.4302	MADLKERLLAPKPASALNVREVSNRPSASGRQAFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGVGEVWQSDSSDMNRRRGSRNFENVFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIQLFDVPSAFQWVLIITGICGVFIFSAFVWFFKYRRLMPL	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g00029	443	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	3	443	IPR039204	-
	Gma15g00029	443	Gene3D	Magnesium transport protein CorA, transmembrane region	130	374	-	-
	Gma15g00029	443	Gene3D	Magnesium transport protein CorA, transmembrane region	381	441	-	-
	Gma15g00029	443	CDD	Mrs2_Mfm1p-like	52	440	IPR039204	-
	Gma15g00029	443	Gene3D	-	40	123	-	-
	Gma15g00029	443	PANTHER	MAGNESIUM TRANSPORTER MRS2-10	3	443	-	-
	Gma15g00029	443	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	380	433	IPR045863	-
	Gma15g00029	443	Coils	Coil	224	251	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00029	Gma-Chr15	259783	264991	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00029	1	443	MRS2 Gene Family	AT1G16010	85.586	0.0	758

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00029	K16075		-	gmx:100779803	796.578

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma13g03322	13	47186496	47189715	Gma15g00029	15	259783	264991	GST