Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00028 ATGCAACACCATGTAGCAGACGGAGCATCTGGTCTTCACTTTATCAATGCATGGTCAGATGTTGCCCGTGGCTTGGATATTTCCCTCCCCCCATTCATTGACAGGACACTACTCCGTGCCCGGGATCCACCTCATCCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCCCCTGCAGCAGCAACTGCAATCCTCAAAACCAGTAGGCTCTGACAGTGCTGTGGCCGTCTCTACTGTCAAATTGACCCGTGACCAACTGAGCACCCTCAAGGGTAAGTCCAGAGAAGATGGCAACAGAATCAGCTACAGCTCTTATGAGATGTTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTTCCTGATGACCAAGAAACCAAATTGTACATTGCAACTGATGGACGGGCAAGGCTGCAACCTCCCCTCACCCCTGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTATAGCAGTGGCTGGTGATCTCATGTCAAAACCAACATGGTTTGCTGCTAGCTGA 543 0.5028 MQHHVADGASGLHFINAWSDVARGLDISLPPFIDRTLLRARDPPHPVFDHIEYKPPPAMKTPLQQQLQSSKPVGSDSAVAVSTVKLTRDQLSTLKGKSREDGNRISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRARLQPPLTPGYFGNVIFTTTPIAVAGDLMSKPTWFAAS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00028 180 Gene3D - 73 180 IPR023213 -
Gma15g00028 180 Gene3D - 1 55 IPR023213 -
Gma15g00028 180 Pfam Transferase family 1 176 - -
Gma15g00028 180 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 180 - -
Gma15g00028 180 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00028 Gma-Chr15 251370 251912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00028 1 179 Monolignol Biosynthesis Gene Families AT5G48930 72.626 2.50e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00028 K13065 - gmx:100801923 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03323 13 47195385 47200083 Gma15g00028 15 251370 251912 GST
Gma15g00028 15 251370 251912 Gma07g00207 07 1703549 1708187 PCT
Gma15g00028 15 251370 251912 Gma08g02023 08 18214660 18219936 PCT
Gma07g00207 07 1703549 1708187 Gma15g00028 15 251370 251912 PCT
Gma08g02023 08 18214660 18219936 Gma15g00028 15 251370 251912 PCT