Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00020 ATGGACTCAACAACTGCAGTGTTGCTGATATTTGTTTCAGTTCTAGTGTGCTGCCACAGTACTGTTATCGTATCCAAGGATGGGAGTGGAAATTATACAACGGTGAGTGAAGCCATTATGAAAGCTCCGGACATGAGTGATAAGCCTTACACCATTCACGTTCGAGCCGGTACTTATGAAGAGTACGTAACCATTCCTGCTAAAAAGACTAATATTAAGCTCGTTGGAGATGGACCTCACCTCACCAAATTAGTTGGCTACCAAAATGGTTCCACCATAGACGTACGAGGAGATGGGTTCATGGCAGAAAAGATGGGATTTGAGAACTGGGCAGGGCTGAAGGCAAGCGCGGCGGTGGCGGTTAGGAATGAGGCAAAGAAGAGTGTATTCTTCGAATGCTCAATCCAAGGAGTCCAAGACACACTTTGGGCGGTTTCGGGGAGTCAGTTCTACAAAAACTGCGACATCTACGGCACGGTGGACTTCATATACGGCAACGCAGCGGCAGTGTTCCAGGACTGCATGCTGTACGCGCGATACAGCGAGTACGTGACCTTCACCGCACAGTCGCGAGAGGATCCAAAGGAGAAGACTGGCTTCAGTTTCCAAAGATGCAAATTCACAATGTCCCCACAGGACTCGGCTAGAAAATCGAAGGTGCTTCGTGCAACGCTGGGGCGTCCTTTGAGAGCCTATTCCACAGTGGCCATTTTCCACTCTTACATCGACTCCATGGTCGATCCTAAAGGTTGGGAGCCCATGGCCCACCAGCCCACTGACAAAGTCACTTACATCGAGTTTCATAATTTTGGGCCGGGCTCCAAAACTGATCATAGGGTTGACTGGCCTGGTGTTAAGGTCCTTTCCCGCCCTACCCCATCCGCCCATTATTTCACTGCTTCCTATCTCTTGGATGCTGACTCTTGGATTCCCTCCACTGGCGTTCCCTTCGACAATCTACTCTAG 966 0.4979 MDSTTAVLLIFVSVLVCCHSTVIVSKDGSGNYTTVSEAIMKAPDMSDKPYTIHVRAGTYEEYVTIPAKKTNIKLVGDGPHLTKLVGYQNGSTIDVRGDGFMAEKMGFENWAGLKASAAVAVRNEAKKSVFFECSIQGVQDTLWAVSGSQFYKNCDIYGTVDFIYGNAAAVFQDCMLYARYSEYVTFTAQSREDPKEKTGFSFQRCKFTMSPQDSARKSKVLRATLGRPLRAYSTVAIFHSYIDSMVDPKGWEPMAHQPTDKVTYIEFHNFGPGSKTDHRVDWPGVKVLSRPTPSAHYFTASYLLDADSWIPSTGVPFDNLL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00020 321 PANTHER PECTINESTERASE 1 320 - -
Gma15g00020 321 SUPERFAMILY Pectin lyase-like 18 318 IPR011050 -
Gma15g00020 321 Pfam Pectinesterase 22 306 IPR000070 GO:0030599|GO:0042545
Gma15g00020 321 Gene3D - 16 321 IPR012334 -
Gma15g00020 321 PANTHER PECTINESTERASE 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00020 Gma-Chr15 197124 200793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00020 19 317 Carbohydrate Esterase AT3G05620 40.064 8.05e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00020 K01051 - gmx:102665195 660.603