Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00018 ATGGGGGGTTCGGTGGTGGAGGACAaccacgacctcgaccacgacctcgacctcgacGATACTCCCTTAGCATCTGCCTCTTCTAAATCCCACCAGCAATTCCATAGCTTCGATTTCGAGGATACAAGTGTTCTAGATTTGCGGCGCTCATCCATCTTTAACATAACACGTATGAGCAGGAGTATTTATTTTGTCTTAATTAAAGCCAAGATCAACCTCTTGCTTCCCTTTGGTCCATTCGCCATTCTCCTACATTACGTAACTGGACACCATGGATGGGTCTTCTTCTTCACCTTATTGGGGATTACTCCTTCGGCAGAACGTCTCGGTTATGCTACCGAGCAGCTTGCCTTCTACACAGGACCCACAGTTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAGCAATATGATAAGGGTTGTTCAGCAATCCCTACTCGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCATTCTTTACTGGTGGCCTTGCCCACTACAAAAAAGTACAGGTTTTTGATAAGGCGGCTGCTGTTGTCAATTCTGGCTTACTCTTGATGGCTGTTATGGGAATACTATTTCCTGCTGTGCTTTACTTTACTCACTCCGAAGTTCATCAAGGGAAGTCAGTCTTGTCTCTTTCAAGATTTAGCAGCTGCATAATGCTACTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGTTTATAGTCCGGTTGGTGAGGGAGGAGAGAATGGTGAAAATTCTGATGTGGAGGAAGATCTTGAATTAACTCAATGGGAGGCAATAATCTGGCTTGCTATCTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGACGCCATACAGGGAGCATCTGAGTCATTGAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAATGCTGCAGAACATGCCAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATCACTATTGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTAAATTTTCAACTATTTGAGACTGCCACACTTTTTATCACTGTGTTAGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATACTATGCTATCTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGATGACTAA 1305 0.4084 MGGSVVEDNHDLDHDLDLDDTPLASASSKSHQQFHSFDFEDTSVLDLRRSSIFNITRMSRSIYFVLIKAKINLLLPFGPFAILLHYVTGHHGWVFFFTLLGITPSAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGLAHYKKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHQGKSVLSLSRFSSCIMLLAYASYLFFQLRSQQNVYSPVGEGGENGENSDVEEDLELTQWEAIIWLAILTAWVSILSGYLVDAIQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00018 434 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016021|GO:0055085
Gma15g00018 434 Pfam Sodium/calcium exchanger protein 282 421 IPR004837 GO:0016021|GO:0055085
Gma15g00018 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma15g00018 434 Gene3D - 269 425 IPR044880 -
Gma15g00018 434 Gene3D - 122 259 IPR044880 -
Gma15g00018 434 PANTHER VACUOLAR CATION/PROTON EXCHANGER 16 431 - -
Gma15g00018 434 TIGRFAM cax: calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
Gma15g00018 434 TIGRFAM caca2: calcium/proton exchanger 65 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00018 Gma-Chr15 183775 190542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00018 20 433 Antiporters AT1G55730 70.120 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00018 K07300 - gmx:100792408 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00018 15 183775 190542 Gma15g00018 15 183775 190542 ECH
Gma13g03334 13 47278914 47291105 Gma15g00018 15 183775 190542 GST