Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00014 ATGAGCAACGTTAACATAGCCTCCACCTCGCGTGGTTCCACCTCCTCCTCCAATGGCCTTCTCACCGTCACCATTACCAGCACCAGCCACCCTGACGACCCTCCCACCGACGACAACGATGACGACGACTTGCTCGCTGATCCGGACGATCCTTTCGATATTACGCATACCAAAAATGCACCTCCCGAGGCCCTCAAGCGTTGGAGACAAGCAGCTTTCGTGCTCAATGCGTCCAGGCGTTTTAGGTACACTCTTGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGATCCCACGCACAAGTCATCAGAGCAGCATTGCTTTTCAGATTGGCTGGTGAACGGGAACTAGTGACAAGTAAAGCAGCAGTGGCATCCCCATCTCCAGTTGGTGAATATACAGTTGGGCTCGAACAACTTGTTTCAATGACTAAGAATCAGAATATTTCTGCTTTACAACAATACGGAGGGGCAATGCTATGTCTTATTCAGGTTAAAGGCTTATCAAATTTACTAAAATCAAATCCGGATAAGGGGATTAGTGGAGATGATGTTGATCTATCAAAGAGGAAAAATGCATTTGGAACTAATACATACCCTCGGAAAAAGGGGAGAAGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTAGTGTCGTTGGTACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGGTGGTACGACGGGGGCAGCATTGCTTTCGCTGTTTTTCTTGTCATTATAGTTACAGGCAATTTATTTAATACTGTCAGTGATTATCGGCAATCTTTGCAGTTTCAGAATTTAAATGCAGAGAAACAAAATATAAAATTGGAGGTCATTAGAGGTGGCAGAACAATACAAATATCCATATTTGATATTGTTGTTGGTGATTTAGTGCCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTTGTAATCACTGGTCACTCGCTTGCCATTGATGAATCGAGTATGACTGGTGAAAGCAAGATTATTCACAAGGATCAAAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGCTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCATTACAGGTTCGTTTGAATGGAGTAGCAACTTTTATTGGCATAGTTGGGCTTACTGTAGCTGTTTGTGTACTTGCAGTCCTCTTGGGAAGATATTTCTCTGGCCATACGAAAGATTTAGATGGAAGAGTACAATTTGTTGCTGGAGAGACTAGTATTAGCGAAGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTAAGTGTGAATTCTGAATTATGTTTTGAAACATCTTTTGTAATAGTTTTTTCAACTCAATATAGAGCCATGCAGGTAACAATTGTGGTGGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACCTTAACTTTTGAAACATATTTTCTTACTTCCGTGCAGGTGCGAAGGCTGTCAGCATGCGAAACTATGGGATCTGCTACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATGTGTTGGAAGGAAGAAACTAAACCCACCAGATGACTTGACAAAATTGCATCCGGAAGTTTTATCTTTGATAAATGAGGGCATTGCACAAAATACAACTGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGGTGGAGGTTTCAGGGTCTCCTACGGAGAAAGCAATTCTTTCTTGGGCAGTGAAGTTGGGGATGAATTTTGATCTTATTAGATCAAATTCAACAATTCTACACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGAGGCCTTGCTCTGAAACTGCCGGACTCTGCAGTACATATACATTGGAAAGGAGCTGCGGAGATAGTTTTAGGAACATGTACTCAATATCTTGATTCTGATGGTCACTTGAAATCTATTGAAGAAGAGAAGGTATTCTTCAAGAACTCTATCGAAGACATGGCTGCTCAGAGCTTGCGTTGTGTTGCCATTGCATACAGATCGTATGATTTAGACAAAATTCCATCAAATGAGGAGGAATTAGACCAGTGGTCCTTACCTGAACACGAGCTTGTCTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAGGATGCTGTGAAAATATGCACCGAAGCCGGTGTTAAGGTACGGATGGTTACGGGTGACAATCTTCAAACAGCAAAAGCAATAGCTTTTGAGTGTGGAATACTGATGTCAAATGATGATGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTATCTGAAAAGGAAAGGGAACAAGTTGCAAAAAAGATAACAGTTATGGGGAGGTCTTCTCCTACTGACAAGCTGTTGCTCGTGCAAGCACTACGTACAGGTGGTGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTAGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAATGTAGCTGCTCTTGTAATAAATGTTGTGGCCGCAATATCTTCTGGTGATGTTCCTTTAAATGCTGTACAGCTTTTGTGGGTCAACGTTATCATGGACACACTTGGGGCTCTTGCACTGGCTACGGAACCGCCAACAGACAACCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACAAATGTCATGTGGAGGAACTTGGGCGTACAGGCTCTCTATCAAGTCACTGTCCTTCTCGTTCTTAACTTCGGTGGTGAAAGTATTCTACGTAATGATCAGGATTCTGTAGCCCATACCATACAAGTGAAGAATACTTTAATTTTCAATGCATTCGTCTTTTGCCAAATATTCAACGAGTTCAATGCTCGAAAACCAGAAGAGATGAATGTCTTCCGGGGAGTGACTAAGAACGGTCTCTTCATGGGAATTGTTGGAATGACCTTCGTGCTTCAGATAATCATAATAGAGTTCCTTGGAAAATTCACAACGACAGTGAAGCTTGATTGGAAGCTGTGGCTTGCTTCTCTTTGTATTGGGCTTTTAAGCTGGCCTCTTGCGATAATTGGAAAATTCATTCCAGTTCCCAAAACACCACTGTCCCGATATTTCAGGAGATTCAGCAAGTCCAAGTCGCAATAG 3375 0.4222 MSNVNIASTSRGSTSSSNGLLTVTITSTSHPDDPPTDDNDDDDLLADPDDPFDITHTKNAPPEALKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRSHAQVIRAALLFRLAGERELVTSKAAVASPSPVGEYTVGLEQLVSMTKNQNISALQQYGGAMLCLIQVKGLSNLLKSNPDKGISGDDVDLSKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVFLVIIVTGNLFNTVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTIQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDQKAPFLMSGCKVADGVGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGRYFSGHTKDLDGRVQFVAGETSISEAVDGVIKIFTIAVSVNSELCFETSFVIVFSTQYRAMQVTIVVVAVPEGLPLAVTLTFETYFLTSVQVRRLSACETMGSATTICSDKTGTLTLNQMTVVEACVGRKKLNPPDDLTKLHPEVLSLINEGIAQNTTGNVFVPKDGGEVEVSGSPTEKAILSWAVKLGMNFDLIRSNSTILHVFPFNSEKKRGGLALKLPDSAVHIHWKGAAEIVLGTCTQYLDSDGHLKSIEEEKVFFKNSIEDMAAQSLRCVAIAYRSYDLDKIPSNEEELDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKICTEAGVKVRMVTGDNLQTAKAIAFECGILMSNDDAVEPNIIEGKTFRELSEKEREQVAKKITVMGRSSPTDKLLLVQALRTGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNVIMDTLGALALATEPPTDNLMHRSPVGRREPLITNVMWRNLGVQALYQVTVLLVLNFGGESILRNDQDSVAHTIQVKNTLIFNAFVFCQIFNEFNARKPEEMNVFRGVTKNGLFMGIVGMTFVLQIIIIEFLGKFTTTVKLDWKLWLASLCIGLLSWPLAIIGKFIPVPKTPLSRYFRRFSKSKSQ 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00014 1124 SFLD C1.7: P-type atpase like 517 894 - -
Gma15g00014 1124 PANTHER CALCIUM-TRANSPORTING ATPASE 488 1119 - -
Gma15g00014 1124 PANTHER CALCIUM-TRANSPORTING ATPASE 49 467 - -
Gma15g00014 1124 PANTHER CATION TRANSPORTING ATPASE 488 1119 - -
Gma15g00014 1124 SUPERFAMILY HAD-like 533 947 IPR036412 -
Gma15g00014 1124 Gene3D - 852 1108 - -
Gma15g00014 1124 MobiDBLite consensus disorder prediction 1 32 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 735 746 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 338 352 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 866 878 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 757 767 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 535 549 - -
Gma15g00014 1124 PRINTS P-type cation-transporting ATPase superfamily signature 842 861 - -
Gma15g00014 1124 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 542 739 IPR023299 GO:0000166
Gma15g00014 1124 MobiDBLite consensus disorder prediction 1 61 - -
Gma15g00014 1124 Pfam haloacid dehalogenase-like hydrolase 532 856 - -
Gma15g00014 1124 Pfam Cation transporter/ATPase, N-terminus 169 234 IPR004014 -
Gma15g00014 1124 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1106 IPR023298 -
Gma15g00014 1124 Coils Coil 677 697 - -
Gma15g00014 1124 CDD P-type_ATPase_Ca_PMCA-like 191 975 - -
Gma15g00014 1124 Gene3D - 368 549 - -
Gma15g00014 1124 Gene3D - 171 367 - -
Gma15g00014 1124 Pfam Cation transporting ATPase, C-terminus 927 1104 IPR006068 -
Gma15g00014 1124 Pfam Ca2+-ATPase N terminal autoinhibitory domain 49 92 IPR024750 GO:0005516
Gma15g00014 1124 Gene3D - 550 742 IPR023299 GO:0000166
Gma15g00014 1124 SUPERFAMILY Calcium ATPase, transduction domain A 291 387 IPR008250 -
Gma15g00014 1124 SFLD p-type atpase 517 894 IPR044492 -
Gma15g00014 1124 SMART Cation_ATPase_N_a_2 168 239 IPR004014 -
Gma15g00014 1124 Gene3D - 62 114 - -
Gma15g00014 1124 Pfam E1-E2 ATPase 290 427 - -
Gma15g00014 1124 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 808 922 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g00014 1124 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 475 1106 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma15g00014 1124 ProSitePatterns E1-E2 ATPases phosphorylation site. 537 543 IPR018303 -
Gma15g00014 1124 PANTHER CATION TRANSPORTING ATPASE 49 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00014 Gma-Chr15 134866 151911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00014 13 1123 Primary Pumps ATPases AT3G21180 71.301 0.0 1585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00014 K01537 - gmx:100802659 1952.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00014 15 134866 151911 Gma15g00014 15 134866 151911 ECH