Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma15g00012 | ATGCAATTAGCGTCAAATGGTGACAAGGAAGAATGTTCAGAAAGCGAACCCATCTTGAATCATCACCATCTTCATTTGCCACCACCCGGAGAATCCTCCTTTTCCTGTGAAATTATTCCTATTTCTGCTGCTGCTTCCGGCGATGATGATTTACAAAACGTTCGGGTTGATGAGACTTGTCATCTCGTAAATGCAGATCAGCCACAATGCCGAATATGCCTCGATATTGGAGGAGAAGATTTAATTGCTCCATGCCATTGCAAAGGTACGCAAAAGTACGTCCACAGATCATGTCTCGATAATTGGAGATCCACCAAGGAGGGGTTCGCGTTTTCTCACTGTACAGAGTGCAGAGCTGTCTTCATATTACGTGCAAATGTCCCACCAGATCGGTGGTGGTTGAGATTAAAATTTCAGTTCCTTGTTGCTAGAGATCATGCATTCATTTTCATAATTGTTCAGCTGGTTGTTGCTTTCTTGGGAGTGCTTGTGTACAAATTTTATGGAGATGAACTGAGGGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTCTAGCCATTGTTTTGGTTGGTTTGCTCTATGGCTTCTTCATAGCGATAATATGTGGTCAAAGAATCAATGAACGCCACTACCATGTTCTTGCCAAACAAGAATTGACTAAGGAATATGTGGTTGAAGATCGAGAACATGTAAAGAATGTGCCTGAACTTGACCCCAGCCATGTGACAGAGCTAAGGATGTTGGGCCTTTACTAG | 774 | 0.4212 | MQLASNGDKEECSESEPILNHHHLHLPPPGESSFSCEIIPISAAASGDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma15g00012 | 257 | Pfam | RING-variant domain | 70 | 117 | IPR011016 | GO:0008270 | |
Gma15g00012 | 257 | SUPERFAMILY | RING/U-box | 65 | 121 | - | - | |
Gma15g00012 | 257 | SMART | ringv_2 | 69 | 118 | IPR011016 | GO:0008270 | |
Gma15g00012 | 257 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 62 | 124 | IPR011016 | GO:0008270 | |
Gma15g00012 | 257 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 2 | 256 | - | - | |
Gma15g00012 | 257 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 122 | IPR013083 | - | |
Gma15g00012 | 257 | PANTHER | OS02G0132300 PROTEIN | 2 | 256 | - | - | |
Gma15g00012 | 257 | CDD | RING_CH-C4HC3_MARCH | 70 | 118 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma15g00012 | Gma-Chr15 | 119440 | 124529 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma15g00012 | 31 | 216 | C3H Transcription Factor Family | AT1G50440 | 67.526 | 2.92e-89 | 262 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma15g00012 | - | - | gmx:100789593 | 533.872 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g03339 | 13 | 47341807 | 47346886 | Gma15g00012 | 15 | 119440 | 124529 | GST |