Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00009 ATGTTGGTTAAAATTCACACAAATTGGTTTGCCCCATTTGCGTTCCCAGTCCGACTGGCACACAAGATTGAGGGTTGTTTTGAGTTGAGTAAGTACGTGTTATTCACGCGTCCTCCCATATCTTCATCATTTGAAGTGGATAACGATAAAGCAAGAAAAAGAAGATCAAGTTGGCGTTGTGGTTGTGGTTCGGAGGAAGCTCGTAGGGCCGTTTCAAGTTACCTTGGAGAATTGGGGGTGTCGGAGGAGGATTCGGTGTGGATCTCGTCAAAGTCACCGGAGTACGTGAAGATGTTGGTGGAAGGTGTGAGGGATTTGGAGCAGTGGCAAATTGCGCTTGCTGGGTTGAGCTTCAAGGACAAGATTATTCATATCGCCGCTCAAAAAGGGGACAAGGGCAAAGTTGCCTACTTAGAGAGTCTGGGCTTTACTCTCTCTTCCTCCATGAACATTGCCAGATATCTCCCCTCTGACACTCACACTCTTCCATCTCTCATGCACAAGGTTACTCGTATCAAGCAACTCTTGTTCTTTTCTCCCACTCCCGACCATCACTTGCTTATCAAAAGCATTCGCCTCATGATGCGCCACCTCTCCATTTCAATTGATGAAGACCTTCAACACACTCTGTCCTTTTTCGAAAAGCTCCAAGCAAAGCCTGGTGGTCTTGGCATTTTGGCTTACAAGAATGCCGCTTTCCGTTCCTTAATCGAATCATTTCCTCGTCTACTTCAGTTATCAGTGGACAACCACTTCACACCCATACTCCATTTTCTCCACAATTTTGGAATCCCCACATTTCGCATCTCAAACATAATACTGGCTTTTCCTCCTCTTCTCTTCTGGGATCTTCAACTCCTTCAAACTAGACTCCTCGTCTTCAAGGAGATTGACCTGCCTGATAAAGATTATGCTAAGCTGTTGCTAAAATATCCTTGGCTTCTATCTACAAGTATTCAAGAAAACTATACGGAGCTCCTTGCCTTTTCATATTCTATCAAGGTTCCAAAGACACAGATAGACCGTGCAATTGAAAGCCACCCTCATCTATTGAGTTGTTCAACTAGCAAGCTGAAGTCAATGGTGGATCAGTTTGCTGAACTAGGAGTTCGAAACAAAAAGTTAAATCAGGTTATTGCTAAAAGTCCTCAACTACTATTGCGGAAGCCCAAAGACTTTCTACAGATTGTTCTATTGTTTGAAAATATGGGTTTTGATAAAGAAACCATCGGAAGAATACTTGCTCGCTGCCCTGAAATTTTTGCTGCCAGCATTAATAAAACTCTACAAAGGAAGATTGAGTTCCTTGGTAGAGTTGGTGTTTCTAAAACTTTCCTTCCTGGGGTTATCAGAAAGTATCCAGAATTACTTGTTTCTGACATTGACAAAACTTTGCTACAAAGGATAATGTACTTGATGAAGTTAGGTCTTTCAGAGAAAGACATTGCATATATGGTACGTACATTTTCTCCTCTCCTTGGGTATAGTATAGAGGGGGTTCTTAGGCCAAAAATAGAATTCCTTGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGGATTACCCTAGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTAAAAGGAAGGGATATCAAATGCAGCTTAAAGGATATGCTGGGAAAAAACGATGAAGAATTTGCTGCTGAGTTTATGGGTATTGGAAGGATGCTCGTCTATCCTCCTGTGTCGTCTAATGATAGCCAGTAA 1752 0.4224 MLVKIHTNWFAPFAFPVRLAHKIEGCFELSKYVLFTRPPISSSFEVDNDKARKRRSSWRCGCGSEEARRAVSSYLGELGVSEEDSVWISSKSPEYVKMLVEGVRDLEQWQIALAGLSFKDKIIHIAAQKGDKGKVAYLESLGFTLSSSMNIARYLPSDTHTLPSLMHKVTRIKQLLFFSPTPDHHLLIKSIRLMMRHLSISIDEDLQHTLSFFEKLQAKPGGLGILAYKNAAFRSLIESFPRLLQLSVDNHFTPILHFLHNFGIPTFRISNIILAFPPLLFWDLQLLQTRLLVFKEIDLPDKDYAKLLLKYPWLLSTSIQENYTELLAFSYSIKVPKTQIDRAIESHPHLLSCSTSKLKSMVDQFAELGVRNKKLNQVIAKSPQLLLRKPKDFLQIVLLFENMGFDKETIGRILARCPEIFAASINKTLQRKIEFLGRVGVSKTFLPGVIRKYPELLVSDIDKTLLQRIMYLMKLGLSEKDIAYMVRTFSPLLGYSIEGVLRPKIEFLVNSMERPVRDVVDYPRYFSYSLEKKIKPRYWVLKGRDIKCSLKDMLGKNDEEFAAEFMGIGRMLVYPPVSSNDSQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00009 583 Gene3D Transcription termination factor 3, mitochondrial 355 569 IPR038538 -
Gma15g00009 583 PANTHER CGI-12 PROTEIN-RELATED 109 575 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 Pfam mTERF 256 562 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 270 300 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 341 371 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 483 515 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 376 406 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 SMART mt_12 516 547 IPR003690 GO:0003690|GO:0006355
Gma15g00009 583 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 109 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00009 Gma-Chr15 76453 80224 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma15g00009 mTERF 4.1e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00009 K15032 - gmx:100802127 1157.13