Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00007 ATGGGCGCGCGCTCTGCTTCGCTCGAGCGCGCACCATCAAATAATGTCGTCAAGTTGTGGTTCACCTTAATATTAATATCATGTTCGTGCACATCAGCGATGTCTTCAGATGCTGAGGCACTGTTGAAGTTCCGGGATTCTTTGAGAAATGTGATAGCCCTTAGTAGTTGGGACCCATCCATAAACCGAAAGCCACCGTGCTCTGGCAACATCCCCAACTGGGTGGGCCTGTTTTGTATGAATGACAAGGTTTGGGGGTTGCGGCTTGAGAACATGGGCCTAACAGGCAACATCGACGTAAAGTCTCTGGGTTCAATCCCCGCTCTCCGAACGGTTAGCCTAATGAACAATACCTTTGTGGGTCCCTTGCCTGACGTGAAGATGCTACCAAATCTCAAGGCCCTCTACTTGTCCTATAATCATTTCTCCGGACAGATACCGGATGATGCGTTTACGGGTTTGAATAGATTGAGGAAACTGTATATGTCCAACAACGAGTTCACAGGTCAAATTCCTTCCTCTCTTGCCACCTTGCCCAGTCTCCTCATCCTCAGGCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCAATTTCAACGCAATAAAAGTTTGAAGATTATCAACCTGTCTAACAATGACTTAGAGGGGCCCATCCCGGCCAATCTAAGCACCTTCGACGCCTCCTCATTTAGCGGAAACCCGGGACTATGCGGGCCGCCCCTGACCAACGAGTACTGCCAAAGGGGAGCCCCAGAGGCGTCCAAAATGCGCCTTCTAAAAATTTTACTTGCTGTGATCGCCATAGCATTGATAATAGCCATCATCCTGGTTGCAGTCCTATTGGTGATATGTCGGTTGAGGTCACAGAAACATCATACGTTGCAGGGCCAAGCCTCCCAAAATTACGCTCCTCCCATTTATGTCAAAACTAAAAGCCTAGCTGATCACTATGCTGCTAGTCCCAGGCTGGTTTCATCATCAGATCGCGGTGGCCATGGACATTCCAGGAGGGGGGAACAAGCTGGCAAACTGACATTCCTCAGCCATCACCAACCCAAGTTTGATTTGCAGGATTTGCTAAAGGCCTCCGCCGAAATTTTAGGAAGTGCCGGTTTTGGGTCTTCCTACAAGGCCGTTGTTTTGGACGGTCAAGCCGTGGTTGTCAAGAGGTACAAGCACATGAACAATGTGCCAAGAGATGAGTTCCACGAGCACATGAGAAGGCTGGGCAACCTCAACCATCCCAATCTTCTCCCTCTTCTCGCCTATTATTATCGAAAAGATGAAAAGTTTTTACTCACTTCCTTTGTTGACAACGGTTGCTTGGCCAGCCATCTTCATGGTAATCGTGACTATCAAAGGCCAGGACTTGATTGGCCCACTCGCTTGAAAATCGTGAAAGGTGTAGCCAGGGGTTTGGCTCACCTATACAGTTCCCTCCCAAGCGTGATTGTGCCTCACGGTCATATCAAATCTTCCAACGTGCTTTTGGATGAATCCTTCGAGCCCCTACTCACTGATTATGCCCTCAGTCCCGTCATCAACCTTGACCATGCCCAACAAATCATCATGCCTTACAAATCTCCCGAGTATGCTCAACTTGGTCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATACTGGAGATCTTGACCGGCAAATTCCCAGAAAACTATCTCACACTTAGGCATAATACTGATTCTGACATAGCCAGTTGGGTAAATACCATGATTACTGAGAAGCGCACCACTGACGTGTTTGACGTAGAGATGGGAGGAATCGGAAATAGTAAAGCTGAATTGCTCAAACTTTTAAAGATTGGCTTAAGCTGTTGTGAGGAGAATGTGGAAAGAAGGCTAGATATCAAGGAAGCTCTTGAGCAAGTTGAAGACTTGAAAGAGACTGAAAATGATGCCATTATTGGAGAATACTCCTCCACTCTCATCACCACCGAAAGAAATGCTTATATAGCTGTGTGA 1989 0.4721 MGARSASLERAPSNNVVKLWFTLILISCSCTSAMSSDAEALLKFRDSLRNVIALSSWDPSINRKPPCSGNIPNWVGLFCMNDKVWGLRLENMGLTGNIDVKSLGSIPALRTVSLMNNTFVGPLPDVKMLPNLKALYLSYNHFSGQIPDDAFTGLNRLRKLYMSNNEFTGQIPSSLATLPSLLILRLDSNKFQGQIPQFQRNKSLKIINLSNNDLEGPIPANLSTFDASSFSGNPGLCGPPLTNEYCQRGAPEASKMRLLKILLAVIAIALIIAIILVAVLLVICRLRSQKHHTLQGQASQNYAPPIYVKTKSLADHYAASPRLVSSSDRGGHGHSRRGEQAGKLTFLSHHQPKFDLQDLLKASAEILGSAGFGSSYKAVVLDGQAVVVKRYKHMNNVPRDEFHEHMRRLGNLNHPNLLPLLAYYYRKDEKFLLTSFVDNGCLASHLHGNRDYQRPGLDWPTRLKIVKGVARGLAHLYSSLPSVIVPHGHIKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNTDSDIASWVNTMITEKRTTDVFDVEMGGIGNSKAELLKLLKIGLSCCEENVERRLDIKEALEQVEDLKETENDAIIGEYSSTLITTERNAYIAV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00007 662 Pfam Protein kinase domain 365 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00007 662 Coils Coil 618 638 - -
Gma15g00007 662 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Gma15g00007 662 Pfam Leucine rich repeat N-terminal domain 35 79 IPR013210 -
Gma15g00007 662 Gene3D Phosphorylase Kinase; domain 1 330 436 - -
Gma15g00007 662 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Gma15g00007 662 SUPERFAMILY L domain-like 64 224 - -
Gma15g00007 662 ProSiteProfiles Protein kinase domain profile. 361 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00007 662 Pfam Leucine Rich Repeat 203 223 IPR001611 GO:0005515
Gma15g00007 662 Gene3D Transferase(Phosphotransferase) domain 1 437 654 - -
Gma15g00007 662 Gene3D Ribonuclease Inhibitor 34 199 IPR032675 -
Gma15g00007 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 645 - -
Gma15g00007 662 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 13 645 - -
Gma15g00007 662 Gene3D Ribonuclease Inhibitor 200 244 IPR032675 -
Gma15g00007 662 SUPERFAMILY Protein kinase-like (PK-like) 365 631 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00007 Gma-Chr15 57819 59907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00007 15 641 Receptor kinase-like Gene Family AT5G35390 48.276 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma15g00007 Pkinase 9.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00007 - - gmx:100801053 1266.52