LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma14g02186	ATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGGCCTTCGTGGTCACCGGTGGACTGGGATTCGTAGGATCTGCTCTCTGCTTGGAGCTCATCCGAAGAGGTGCTAGAGAGGTGCGAGCCTTTGACCTCCGCCTCTCTTCTCCATGGTCGCGTCCTCTCAAGGTCAAGGGAGTCCTTTGCGTCCAAGGGGATGTTGCCCGCAAAGAAGACGTGGAAAGGGTCCTCCGCGGTTCCGACTGCGTATTCCACCTTGCGGCCTTCGGAATGTCAGGCAAAGAGATGCTCCAATTTGGTCGCATTGATGAAGTCAACATAAATGGGACTTGCCATGTTATCGATGCTTGCCTCCACCTCGGCATCAAAAGGCTTGTCTACTGTAGCACAAACAATGTTGTCTTTGGCGGTCAACAGATCATCAACGGGAATGAGACATTGCCCTATTTCCCAATTGATCACCATGTCGATCCATATGGCCGCAGTAAATCAATTGCTGAACAGTTGGTTCTTAAGAACAATGCCCGTACTCTCAAGAACGACTCCGGGAATCGTCTTTACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGGTGAAGACAGGCACCTTCCAAGGATCGTAACCTTGGCAAAGTTGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAGTCAGATTGGCTTTTTGTGGATAACCTTGTCCTTGCTCTTATATTGGCGAGTATGGGACTTTTGGATGACAATCTTAGCAAGGGGAAACGTCCTGTTGCTGCTGGCCAGGCCTACTTTATATCTGATGGCTCCCCAGTCAATTCTTTTGAATTCCTGCACCCTCTACTTAGGAGTTTGGATTATGAACTGCCAAAGACTTCCCTACCGGTCGACCGTGCTCTTGTTCTCAGCAGGATTTGCTGGGCTGTTTATACAATCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAGCCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGAGTGACCCATTATTTCTCTTATCTTAAAGCCAAAGAGGAGATTGGCTATTTTCCCATGGTGACCTCGCGAGAGGGGATGGCTTTGACCATATCTTACTGGCAAGAGAGGAAACGAACAACTCTGGATGGACCAACAATCTACGCGTGGTTGTTTTGTGTCATTGGAATGATCTCACTGTTTTGTGGTGCTTTCTTACCTGACATAGGGATCATGTCCCTTCTCAGAGCTACATGTCTATTTGTCTTTCGGTCAATGTGGGTGACAAGGTTGGTGTTTCTTCTGGCTACAGCTGCACATATTGCTGAGGCCATTTATGCTTGGTACCTGGCTAAGAGGATGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGATGTTTTCGTTGCGTTTACTATTGAAAAGAGCAAGGAAATAG	1437	0.4823	MHLSENEGIEGKAFVVTGGLGFVGSALCLELIRRGAREVRAFDLRLSSPWSRPLKVKGVLCVQGDVARKEDVERVLRGSDCVFHLAAFGMSGKEMLQFGRIDEVNINGTCHVIDACLHLGIKRLVYCSTNNVVFGGQQIINGNETLPYFPIDHHVDPYGRSKSIAEQLVLKNNARTLKNDSGNRLYTCAVRPAAIYGPGEDRHLPRIVTLAKLGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDGSPVNSFEFLHPLLRSLDYELPKTSLPVDRALVLSRICWAVYTILYPWLNRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYFPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCVIGMISLFCGAFLPDIGIMSLLRATCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRMDPANARGWFWQTFALGMFSLRLLLKRARK	478

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma14g02186	478	Pfam	3-beta hydroxysteroid dehydrogenase/isomerase family	15	295	IPR002225	GO:0003854\|GO:0006694\|GO:0016616
	Gma14g02186	478	Gene3D	-	4	375	-	-
	Gma14g02186	478	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	10	360	-	-
	Gma14g02186	478	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	10	376	IPR036291	-
	Gma14g02186	478	Pfam	Transmembrane protein 254	387	473	IPR028110	-
	Gma14g02186	478	PANTHER	SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1	10	360	-	-

Showing 1 to 6 of 6 entries

Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma14g02186	1	478	Lipid Metabolism Gene Families	AT2G33630	67.364	0.0	686

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma14g02186	-		-	gmx:100808827	966.452

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma14g02186	14	53011023	53013397	Gma14g02186	14	53011023	53013397	ECH
	Gma14g02186	14	53011023	53013397	Gma04g00178	04	1528153	1531984	PCT
	Gma14g02186	14	53011023	53013397	Gma06g00169	06	1494661	1498747	PCT

Showing 1 to 3 of 3 entries