Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02180 ATGCCACTGTTACCACGTAGAGGTGTTCAAGCTAGCAGTAGCATCGTCCCCTTCTCCAAAGATCGTATAACCTTCAATCCATCTTCATCTCCGGTGAGTCAAGTTGCAGCTACTTTGGCATCGTATTTTCTGGCAGAATGTTCCGATTCAACTGTTCAGCTCAATATCAAGACTCTAGATTCCCGCATCTACAGTTTTCAAGTGGACAAAAATATGCCTGTTTCATTGTTCAAAGAGAAAATTGCAAATGAAATTGGTGTTCCTGTTAATCAGCAACGGCTGATATTTAGAGGAAAAGTCTTAAAGGATGAGCATGTTCTTTCTGAGTATCATGTTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAACCAAATCAGTCTCAGGCTTCTGGTATGAGTTCTGGTGAGTCAACTGGTACAAGTGGTAACCGAGGAAATGGTGTAGGCTCAGGGGCTCCTCGTAATCGTGTTGGGCAAATTTCACATAGTGTTGTTCTGGGAACATTTAATGTGGGTGAACAAGGTGAAGGAATTGTTCATGACCTCACTCGGGTTATTGGGCATGTTTTAAATTCTATTGGAAACAGTGGCCAGAGCACAATTAGTGGTCCTAATGCTACGCAAACTTCTTCAGTTCAGCCAAGGAATGAAACTGATGGAATGCATGCTGGAAATCAAAACCCAGCAGGAAATCAGGCACCATCTGGACAGACATTTCATGGCCCGACATTTCAATCTGTCTCTCATGTTGTTCAGATTCCTGTGGCGGCAGGGACCATACCCATTCCTTCTCTCAATGCACCAATTCCTGATTCACTGAACACACTGTCTGAGTTTATGAATCGCATGGAACAGATACTAACACAAAATGGTGATGATGTTGAAATTGTTGCTCTTTTATTTTTAATTTTAAAGAAATTGAAATATTTATATTTGCTTAATGCTTATGCAGGTTATCAATCAAATCTTTCATCTGCTAACCCTAGAGATCAGCTAGTGGAATTGCCTTCTAATGTACAAGGGTTGCCGACACTTGAAGCATTAAGCACTGTCTTGCATCGTGCAGAACAGTTACTTGGTGGTCAAGCTGTTGCTGCACTATCTCATATTGCAGGGCGCTTGGAAAGAGAAGGTACTTCTGCTGATCTGCACATAAGGGGTCAAATACAATCAGAATCAGTGCAAATAGGACTTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTTGGCCGAACAATGTTGACACTGCGTATGGGACAGTCTTCTGCAGAATCTGTTGTTAACGCTGGACCAGCAGTTTACATCTCTCCATCAGGGCCAAATCCAATAATGGTGCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGTGGTCCAGTTCCCCCCTCAACTCCTGCAACTTTAGGCACCATTGGAATTGGAAATGCTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTGTTTCAGCCATTGGTTCTAGGGAAAATAATGGCGAGGGGACAAGAAGTGAACACCATAATGAGCCTGGCTCTGGTGATTCAGGTTCAACACGGGTATTACCTGTTAGAAATGTCATAGCAGCAACTATCCCATCACACCCTCCTGGTGTTGGAGTCTCTAGTAGCACACAAACTGGGTTTGGTATTTCTACCTCACAGCCACCTTCTGATTCAGCTTCATTGTCATCTGTTTTAGCTGAAATCAATTCTCGCCTTAGAAACGTTGTTGGTAATATGCAAGGAGATAACACAGTTCCATCAGGTCAAATGGAATCAAACAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCTCCTACAGTAAACAAACAGCAAGATACCGTGGACGTGAATGGTTTTGGGGCTATCAGTGCTTCCTCAGTTGGCTGCACTTCTGAAAGTGAAGTACAGAAGGTCCAAACCGAGGCAGTCCAAACCTCAAGTAATGTTTTGGTTGACAAATTTGTTTCAAGTTCTTCCAACCAAGATTTACAAAGTTGTTCTAGTGGAGAAACAATAGTAAAACCAGAAATAGAACAAGATGTTCTGGCTGTAAGTGAAAGACAAAATGTAACTGAACCTGCCAAAGCTGCTCCACTAGGATTGGGTGTGGGTGGTTTAGAGCGCAAGAGGCGAACTAGACTTCAACCTCCTGTAAGTAAAGGTGCTGATGATGGATCATCCAGTTCTTCTGTCAATCAAAATCAGCAAACCAGAACAGATGGTCAACATATATTGCAAACTCTTGCAAGTCATGGATCCGGTTTGAATTCAAGAAATGCTAATGGGCCATCCCAGCGGCCCTTGCCCTCCAGTGATCGTCCAATTGATGTGGCTGGTTTAATGTCTCAGGCTTTACATAGTCCTGCCTTGAATGGTTTGTTGGAAGGAGTTTCACAGCAAACTGGAGTTGACTCACCTGATGGCCTGAGGAATATGTTGCATCAGTTCACCCAGAGCCCGCAGATGATGAACACGGTTAATCAAATTGTCCAACAGGTTGGCAGTCAGGATGTGGGGAATATGTTTGCTGGAACGGAAAGAGGGCAGGGTGGTGGTATTGACATTTCAAGGATGTTTCAACAGATGATGCCCATTGTATCTCGAGCCCTTGGTGGGGGAAATCCTTCCTCACTATTCTCTGCTGAAGAAGCTGAACCCCATGCACCCTACCGAGATGGAACAGTTGACAGAGATGAATATTCTGATAATCAAAGTTTACAGCTTTACCTTCAACCACTGGCTGAGAGGATTGAGCACCTGGGTCCTTCTACTGATATTTTCCGTGCTGTAGCTGAAATTGCTGTCCAGCTATCTGGCAGTGGAAGCACTTCTAATGATCTTCTGGATGAGTTGTGCAGCAATGAGAGTCTTGCCAGGGAATATGTAGATATGTTGCGATTTGATGTAAGTAAGCTGCTCGAGGGACATTCTGAAACGGACAATGTCTAA 2976 0.4365 MPLLPRRGVQASSSIVPFSKDRITFNPSSSPVSQVAATLASYFLAECSDSTVQLNIKTLDSRIYSFQVDKNMPVSLFKEKIANEIGVPVNQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQSQASGMSSGESTGTSGNRGNGVGSGAPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNSGQSTISGPNATQTSSVQPRNETDGMHAGNQNPAGNQAPSGQTFHGPTFQSVSHVVQIPVAAGTIPIPSLNAPIPDSLNTLSEFMNRMEQILTQNGDDVEIVALLFLILKKLKYLYLLNAYAGYQSNLSSANPRDQLVELPSNVQGLPTLEALSTVLHRAEQLLGGQAVAALSHIAGRLEREGTSADLHIRGQIQSESVQIGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPVPPSTPATLGTIGIGNAPRNVNIHIHAGTSLAPIVSAIGSRENNGEGTRSEHHNEPGSGDSGSTRVLPVRNVIAATIPSHPPGVGVSSSTQTGFGISTSQPPSDSASLSSVLAEINSRLRNVVGNMQGDNTVPSGQMESNSRDLSSGSESRPPTVNKQQDTVDVNGFGAISASSVGCTSESEVQKVQTEAVQTSSNVLVDKFVSSSSNQDLQSCSSGETIVKPEIEQDVLAVSERQNVTEPAKAAPLGLGVGGLERKRRTRLQPPVSKGADDGSSSSSVNQNQQTRTDGQHILQTLASHGSGLNSRNANGPSQRPLPSSDRPIDVAGLMSQALHSPALNGLLEGVSQQTGVDSPDGLRNMLHQFTQSPQMMNTVNQIVQQVGSQDVGNMFAGTERGQGGGIDISRMFQQMMPIVSRALGGGNPSSLFSAEEAEPHAPYRDGTVDRDEYSDNQSLQLYLQPLAERIEHLGPSTDIFRAVAEIAVQLSGSGSTSNDLLDELCSNESLAREYVDMLRFDVSKLLEGHSETDNV 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02180 991 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 37 293 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 585 622 - -
Gma14g02180 991 ProSiteProfiles Ubiquitin domain profile. 52 127 IPR000626 GO:0005515
Gma14g02180 991 MobiDBLite consensus disorder prediction 125 149 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 730 747 - -
Gma14g02180 991 Pfam Ubiquitin family 54 124 IPR000626 GO:0005515
Gma14g02180 991 SMART ubq_7 52 123 IPR000626 GO:0005515
Gma14g02180 991 MobiDBLite consensus disorder prediction 704 747 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 543 570 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 883 904 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 125 157 - -
Gma14g02180 991 PRINTS Ubiquitin signature 104 125 IPR019956 -
Gma14g02180 991 PRINTS Ubiquitin signature 83 103 IPR019956 -
Gma14g02180 991 MobiDBLite consensus disorder prediction 761 784 - -
Gma14g02180 991 PANTHER OS07G0498800 PROTEIN 37 293 - -
Gma14g02180 991 PANTHER OS07G0498800 PROTEIN 318 989 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 196 242 - -
Gma14g02180 991 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 318 989 - -
Gma14g02180 991 CDD Ubl_ubiquitin_like 54 121 - -
Gma14g02180 991 SUPERFAMILY Ubiquitin-like 42 126 IPR029071 -
Gma14g02180 991 MobiDBLite consensus disorder prediction 761 777 - -
Gma14g02180 991 MobiDBLite consensus disorder prediction 501 570 - -
Gma14g02180 991 Gene3D - 44 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02180 Gma-Chr14 52926876 52943593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02180 52 123 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 4.79e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02180 - - gmx:100811870 1684.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g02497 17 42980657 42991089 Gma14g02180 14 52926876 52943593 GST