Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02160 ATGAGTGAAGACGAGGAGATGAAAGATCAGGCAACGCCTTCACACTTGCTTTCTTCAGTTCCTCCATCTACATTGCACCATTTGAAGGGAATAGCATCAATTATTGAAACCGGTTCGTACTCAAAGGAAGTTCGTCGAATTGCTCGTGCCCTGCGCCTTACATTTGCATTTAGGCGTAAATTGACAACACCAGTTCTCTCATCTTTTCTTGATTATGTTCTTACTCCCGCTTCTGAACCTCACACTAGGTTATCCTCTTATCTCCCTAATCCTAAGGAGGGTGATCGAGAGATGGAAGTGGACAGTGCAACATCTACTATTCAAACCCTGGCGGCGAAGCACTTGTTGCCTGAGCTAGAAATCTACTGTTACCTCCTTGTCCTTCTTTTTCTGATTGACCAGAAAAGATACGATGCGGCCAAAGCTTGTTCCTCAGCAAGCATTGTTCGGCTGAAGAGCCTGAATAGAAGAACTGTCGATGTTATTGCATCTAGACTGTACTTTTATTACTCATATAGCTATGAGCTTACAGGAAATCTTGCTGAAATTCGAGGCAACCTCCTTGCATTGCACCGGATTGCTACCCTGCGTCATGATGAGCTGGGTCAGGAAACCCTTCTGAATCTGTTACTTCGTAACTATCTACATTACAACCTATATGATCAGGCAGAGAAGTTGAGGTCCAAGGCTCCACGTTTTGAGGCACATTCAAACCAGCAGTTCTGTCGTTATCTCTTCTACCTTGGGAAAATTCGGACAATTCAGTTGGAGTACACAGATGCAAAAGAGTCACTCTTGCAGGCTGCTCGTAAAGCTCCCAGTGCAGCACAGGGTTTTCGGATTCAATGTAACAAGTGGGCTGTGATAGTGCGTTTATTATTGGGAGAAATACCTGAGAGGACCGTCTTTATGCAGAGAGGAATGGAGAAAGCTTTGAGGCCTTACTTTGAGCTTACTAATGCTGTCCGGATTGGTGACTTGGAGCTATTTAGGAATGTTGCAGAGAAGTTTGGTACTACTTTCAATAGAGACCGAACTCATAATTTGATTGTTCGGCTCCGTCATAATGTCATCCGGACTGGTTTACGCAACATCAGCATATCATATTCACGCATCTCGCTAGTTGATGTAGCTAAAAAGTTGAGGTTGAACTCTGCAAGTCCTGTTGCTGACGCTGAGAGCATTGTAGCAAAGGCTATCCGTGATGGGGCTATTGATGCTTCATTGGATCATGCCAATGGGTGGATGGTATCCAAGGAAACTGGAGATATCTACTCTACAAATGAGCCTCAGTTGGCATTTAATTCTCGGATTGCCTTTTGTCTTAACATGCACAATGAGGCAGTTCGAGCACTGCGTTTTCCACCAAACACACAGAAGGAAAAGGAAAGTGCTGAGAAGAGGAGAGAGAGGCATCAACAAGAGCAAGAATTGGCTAAACATATCGCAGAGGAAGATGATGATGACTTTTGA 1473 0.442 MSEDEEMKDQATPSHLLSSVPPSTLHHLKGIASIIETGSYSKEVRRIARALRLTFAFRRKLTTPVLSSFLDYVLTPASEPHTRLSSYLPNPKEGDREMEVDSATSTIQTLAAKHLLPELEIYCYLLVLLFLIDQKRYDAAKACSSASIVRLKSLNRRTVDVIASRLYFYYSYSYELTGNLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPSAAQGFRIQCNKWAVIVRLLLGEIPERTVFMQRGMEKALRPYFELTNAVRIGDLELFRNVAEKFGTTFNRDRTHNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLNSASPVADAESIVAKAIRDGAIDASLDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNTQKEKESAEKRRERHQQEQELAKHIAEEDDDDF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02160 490 MobiDBLite consensus disorder prediction 456 483 - -
Gma14g02160 490 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 348 441 - -
Gma14g02160 490 Pfam Proteasome regulatory subunit C-terminal 423 489 IPR013586 GO:0000502|GO:0030234|GO:0042176
Gma14g02160 490 SUPERFAMILY "Winged helix" DNA-binding domain 349 424 IPR036390 -
Gma14g02160 490 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3 1 490 - -
Gma14g02160 490 Coils Coil 457 484 - -
Gma14g02160 490 MobiDBLite consensus disorder prediction 455 490 - -
Gma14g02160 490 MobiDBLite consensus disorder prediction 1 21 - -
Gma14g02160 490 Pfam PCI domain 314 419 IPR000717 -
Gma14g02160 490 ProSiteProfiles PCI domain profile. 242 423 IPR000717 -
Gma14g02160 490 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 1 490 - -
Gma14g02160 490 SMART PINT_4 348 441 IPR000717 -
Gma14g02160 490 Gene3D - 242 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02160 Gma-Chr14 52738780 52744119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02160 K03033 - gmx:100819526 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02160 14 52738780 52744119 Gma14g02160 14 52738780 52744119 ECH
Gma17g02486 17 42898576 42903804 Gma14g02160 14 52738780 52744119 GST
Gma14g02160 14 52738780 52744119 Gma04g00201 04 1723532 1726452 PCT
Gma14g02160 14 52738780 52744119 Gma06g00189 06 1655488 1658963 PCT
Gma04g00201 04 1723532 1726452 Gma14g02160 14 52738780 52744119 PCT
Gma06g00189 06 1655488 1658963 Gma14g02160 14 52738780 52744119 PCT