Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02159 ATGGGCAAAATGGGCAAAATTATGCTTGTTTTGGGTAGCCTCATTGGATTATGCTGTTTTTCAATCAATACCTATGCCTTCTCACCTTCTGGATGGACCAATGCCCATGCCACTTTTTACGGGGGTAGTGATGCTTCAGGAACTATGGGGGGAGCTTGTGGGTATGGGAATCTGTATGCAACTGGGTATGGAACTAGAACTGCAGCTTTAAGCACTGCCTTATTTAATGATGGAGCTTCCTGTGGTCAGTGCTACAAAATTATATGTGATTACAAAGCAGACTCTAGATGGTGCATCAAAGGAAGATCTGTAACCATTACTGCCACAAACTTTTGCCCTCCCAATTTCGCCCTTCCTAACAACAATGGAGGCTGGTGCAACCCACCACTCAAGCATTTTGATATGGCCCAACCCGCTTGGGAAAAGATTGGTATTTACAGAGGAGGGATCGTCCCCGTGCTATTCCAAAGGGTTCCATGCAAAAAGCATGGGGGGGTTAGGTTCAGTGTGAATGGGAGGGACTACTTCGAGCTAGTGTTGATCAGCAATGTGGGTGGTGCTGGATCCATCCAATCTGTGTCCATTAAAGGCTCAAAAACTGGATGGATGGCTATGTCTCGAAATTGGGGTTCTAATTGGCAATCCAATGCGTATTTGAATGGTCAATCTTTGTCCTTCAGGGTCACCACCACTGACGGAGAAACCAGAGTTTTCCAAGATATTGTTCCAGCAAGTTGGACATTCGGCCAAACTTTCTCTAGCCCAGTTCAGTTCTAA 777 0.4569 MGKMGKIMLVLGSLIGLCCFSINTYAFSPSGWTNAHATFYGGSDASGTMGGACGYGNLYATGYGTRTAALSTALFNDGASCGQCYKIICDYKADSRWCIKGRSVTITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFSVNGRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSRNWGSNWQSNAYLNGQSLSFRVTTTDGETRVFQDIVPASWTFGQTFSSPVQF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02159 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Gma14g02159 258 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Gma14g02159 258 SUPERFAMILY PHL pollen allergen 162 254 IPR036749 -
Gma14g02159 258 Pfam Expansin C-terminal domain 166 243 IPR007117 -
Gma14g02159 258 PANTHER EXPANSIN-A15 7 258 IPR002963 GO:0009664
Gma14g02159 258 Gene3D - 18 161 IPR036908 -
Gma14g02159 258 Pfam Lytic transglycolase 67 154 IPR009009 -
Gma14g02159 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Gma14g02159 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 165 IPR007112 -
Gma14g02159 258 SMART dpbb_1 67 155 IPR007112 -
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Gma14g02159 258 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Gma14g02159 258 PANTHER EXPANSIN 7 258 - -
Gma14g02159 258 Gene3D - 165 258 IPR036749 -
Gma14g02159 258 SUPERFAMILY Barwin-like endoglucanases 31 183 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02159 Gma-Chr14 52735742 52737646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02159 67 258 Expansin Gene Family AT1G20190 83.333 2.15e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02159 - - gmx:548040 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02159 14 52735742 52737646 Gma14g02159 14 52735742 52737646 ECH
Gma17g02485 17 42895333 42897384 Gma14g02159 14 52735742 52737646 GST
Gma14g02159 14 52735742 52737646 Gma04g00203 04 1735939 1737936 PCT
Gma14g02159 14 52735742 52737646 Gma06g00190 06 1661724 1667169 PCT
Gma04g00203 04 1735939 1737936 Gma14g02159 14 52735742 52737646 PCT
Gma06g00190 06 1661724 1667169 Gma14g02159 14 52735742 52737646 PCT