Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02124 ATGGGAGTTCCAGCGTTCTACCGATGGCTGGCGGAGAAGTATCCGATGGTGATTGTGGACGCGATCGAAGAGGAACCGGTCGTAATCGACGGCGTTCAAATCCCCGTCGATACGAGCAAGAAGAACCCTAACAACATCGAATACGATAACCTCTATCTCGACATGAACGGCATCATTCATCCTTGCTTCCACCCCGAGGATAGGCCGTCTCCGACGTCGTTCGATGAGGTGTTTGAGTGCATGTTCGACTACATTGACAGGCTATTCATTATGGTGCGGCCGCGGGAGCTGCTCTATATGGCTATTGACGGTGTTGCGCCGAGGGCGAAAATGAACCAGCAACGGTCTAGGCGGTTTAGGGCTGCGAAAGATGCAGCTGATGCGGCTGCTGAAGAAGCAAGGTTAAGGGAGGAATTTGAGAAGGAGGGAAGAAAACTTCCTTCTAAAGGAGAGTCACAGACTTTTGATTCAAATGTCATTACACCTGGAACTGAATTTATGGCTGTTTTATCAATTGCACTTCAGTACTATGTTCATCTTAGGTTGAACAATGACCCTGGTTGGCAAAATATTAAGGTTATTCTTTCTGATGCAAATGTTCCTGGTGAAGGGGAGCATAAGATTATGTCCTATATCCGCCTGCAGAGAAATCTTAAAGGTTATGATCCAAATACACGACATTGCCTATATGGTTTGGATGCCGATCTGATTATGTTGGCATTGGCTACCCATGAAATTCATTTTTCAATTCTTAGAGAGATTGTATTTACTCCTGGACAAGACAAGTGCTTCCTCTGTGGTCAGATGGGTCATATGGCTGCAAACTGTGAAGGAAAGGCAAAAAGGAAGGCAGGAGAGTTTGATGAAAAAGGAGAGGCTATTGTGACGAAAAAGCCCTTCCAGTTCCTAAATATTTGGACTCTGAGAGAATATCTGGAGTATGAGATGAGAATATCTAATCCTCCTTCcgagattgattttgattgcattgtggatgattttatcttcatgtgtttttttgtcggcaatgattttctaccacatatgcctacactagagattcgtgagGGTGCAATTAACTTGCTGATAGCAGTATACAAGAAGGAATTTAGGGAATTTGGTGGTTATTTAACCAATGGAAGCACGATAAACTTGAGCAGGGTGGAGCACTTCATTCAGGCTGTTGGATCTTATGAAGATAAAATATTCCAGAAAAGAGCTCGATTGCATCAGCGACAAACAGAAAGAATAAAGCGTGAAAAGGCACAGGCAAGGAGGGGAGATGATGCTGAGCCTCAATTTCAACCAGAGTCTTTAGTCGCAGTTTCACGATTCCATGGTTCTCGTCTTGCTTCAGCTCCAACTCCTCCACCATTTCAACCTTCTGGGCATTATAATTCTCAAGCGTCTGCATCAGTTAGAAAAGACAATAAAGAAGCATTTGAGAGGCCTCTTAAAGTTTCTAGGGTTTCTTCTGGAGCAACTGTTGCCGCTGCTATTGTTGAAGCTGAGAATAATCTTGAAATAGATGCTCAAGATAATAAAGACGAATTGAAAACAAAATTAAAGGAGATACTTCGAGAGAAATCTGATGTATTTAACTCAAAAAATGCTGAAGAGGATAAGATTAAGTTGGGAGAACCTGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCcaaaactcctgaggaacttgaagctatacgtaaagatgttgtcttgaaatacactgaaggcctatgttgggtgatgcactattattatgaaggtgtttgttcttggaattgGTTTTATCCTTATCACTATGCCCCCTTTGCGTCTGATCTCAAAGGCCTTGGTGAACTCGATATTAGCTTTAAGCTGGGTACCCCATTCAAACCATTTGACCAGCTTCTAGGGGTCTTTCCTGCTGCAAGCTCTCATGCACTTCCTGAGCCGTATAGGAGACTTATGACGGATCCAAACTCACCAATCATTGATTTTTATCCAATTGACTTTGAAGTGGACATGAATGGCAAACGCTTTGCTTGGCAGGGTATTGCTAAGTTGCCATTTATTGATGAAGTGCGTCTTCTTGCAGAAGTTCAAAAGATTGAAAACTTGTTAACACCAGATGAAAAGCGACGGAATGCTATAATGTTCGACTTGATCTTTGTGAATTCTTGTCATCCTCTCTCTGCATGCATAAGTACACTTGACAACAAGTGTAAAAACATGCCAAATAGTGAACGGGCTGTGGTCAAGGAAAAAATCAACCCCAAAGAAAGTGGTGGAATGAATGGTTACATATCCTTATGTGGTGGAGAACCTTGCCCTCCTATTTTTAGGTCTCCTATTGCAAGCATGGAAGATATCATGGACAATCATGTTATATGTGCAATATATAGACTCCCAGATGCACATAAACATATTACCCGACCACCACAAGGAGTTAAATTTCCAAAAAAGATTGTTGAAATTGGGGATCTAAAACCTGAACCTGTTTTGTGGCATGAAGATTCAGGCAGGAGACACCATTCTGAAAATGGGAGGAAAAACCCTCCAGGATCTATTTCTGGTCGGGAGCTTGGGGATGCAGCACACAGACTCATTGTCAATTCCTTACAGGCAAAGGTTGATACTAATGGATACCGCCATCCGCATAATGGACCTCCTATATCTTATCCTGCACCCATGGGTCATTATCGACAACCAGTGCCTTCGTATGGTTATGAATCCAGCCCAGGATATGTTGCAATGCCGCCACCTATTTCAGCTCCCTCACTCCAAGGCAGACCACAGTTTGCACCTTACAATGCTGCCCCTACTGCTCAGCAGTATGGTTGCAATCAACCATACCCGCCACCACCAGTGGTGTACAATCATCCTCGTCAGCAATCAAATTCTTACGAAAGAAATGACTATCAGCACGCCAGATCAAATCATTATGAAAGAAATCACCATCAAGGTAGTGGGGGTAGTTCAAGGCATGGATATCAATCATCAGGAAATAATCACAATGCCAGGTTTAATAATTCACATGGTTCATATGGTAGTCACCATCATGAAGTTAGTCACCACAACCAAAACTTCCAACCTTCTAGAGCTCATCAGAATTGGACTCCACCAAACAACCCGAGTGGGCACAGGGATTATGGTCATCATTCATCCAATCAATATTCTTTATTAGATAGAAGAGGAAACAGGAATCCAATGCCCCCACCTGGTTACAGTCGCAAATAA 3228 0.4021 MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVLSIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLALATHEIHFSILREIVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVTKKPFQFLNIWTLREYLEYEMRISNPPSEIDFDCIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTNGSTINLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAEPQFQPESLVAVSRFHGSRLASAPTPPPFQPSGHYNSQASASVRKDNKEAFERPLKVSRVSSGATVAAAIVEAENNLEIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAASSHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVQKIENLLTPDEKRRNAIMFDLIFVNSCHPLSACISTLDNKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPIASMEDIMDNHVICAIYRLPDAHKHITRPPQGVKFPKKIVEIGDLKPEPVLWHEDSGRRHHSENGRKNPPGSISGRELGDAAHRLIVNSLQAKVDTNGYRHPHNGPPISYPAPMGHYRQPVPSYGYESSPGYVAMPPPISAPSLQGRPQFAPYNAAPTAQQYGCNQPYPPPPVVYNHPRQQSNSYERNDYQHARSNHYERNHHQGSGGSSRHGYQSSGNNHNARFNNSHGSYGSHHHEVSHHNQNFQPSRAHQNWTPPNNPSGHRDYGHHSSNQYSLLDRRGNRNPMPPPGYSRK 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02124 1075 Gene3D - 1 143 - -
Gma14g02124 1075 Gene3D - 144 384 - -
Gma14g02124 1075 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Gma14g02124 1075 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Gma14g02124 1075 MobiDBLite consensus disorder prediction 941 1075 - -
Gma14g02124 1075 PANTHER 5'->3' EXORIBONUCLEASE 1 977 IPR027073 -
Gma14g02124 1075 Coils Coil 122 142 - -
Gma14g02124 1075 Coils Coil 508 528 - -
Gma14g02124 1075 MobiDBLite consensus disorder prediction 833 857 - -
Gma14g02124 1075 MobiDBLite consensus disorder prediction 970 986 - -
Gma14g02124 1075 CDD PIN_XRN1-2-like 51 312 - -
Gma14g02124 1075 Gene3D - 617 714 - -
Gma14g02124 1075 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Gma14g02124 1075 MobiDBLite consensus disorder prediction 449 473 - -
Gma14g02124 1075 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
Gma14g02124 1075 MobiDBLite consensus disorder prediction 987 1013 - -
Gma14g02124 1075 MobiDBLite consensus disorder prediction 1024 1060 - -
Gma14g02124 1075 Pfam Xrn1 helical domain 325 824 IPR041412 -
Gma14g02124 1075 PANTHER 5'-3' EXORIBONUCLEASE 1 977 - -
Gma14g02124 1075 MobiDBLite consensus disorder prediction 413 432 - -
Gma14g02124 1075 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Gma14g02124 1075 PIRSF Exonuclease_Xrn2 1 1064 IPR017151 GO:0004534|GO:0005634|GO:0006139
Gma14g02124 1075 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02124 Gma-Chr14 52404940 52416153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02124 - K12619 gmx:100785683 2138.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02124 14 52404940 52416153 Gma14g02124 14 52404940 52416153 ECH
Gma17g02453 17 42554479 42566314 Gma14g02124 14 52404940 52416153 GST