Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02077 ATGGCCTCCAAGTTCTCTTTTCTAACCCTTCTTATGGAGAGAAGAAAACCTTCTAAAGATAACAACAACAACAATAATGACTTAGCATTTGTGAAGGCAGCTGCATGGGCATGGTACCAACACAACTCAGGCTCTAAGGGGAAAACTATTAGCGAGTTTGATGCTACAATAACTCGCCGTGTGCCAAGGCCTTCACGTTACAAGTTAGAAGCAATGAGAATAATGGCTCAAGAAGCTCCAAGTGAAGGGTCACCCACGATTCGCGCCAAGAAATTGTCACTTCTTGATGAATATGAAGTACAAAGCATTTCAAGGCAACTTAGTGGTCTTGTTGCGGAGGATTCTAAATCTAATAATGATAATAAGCACAACAAACTTTTCAAGGGTGCCGACAATTCTACAAATAGAAGGACTACGAAAAAGAAGAAGGTTAGAAAAGGGTTTTGGCTAGGGCATGGTGCTGTTTGTGGTAGAGAAGAAGATGTGGTTGATCCCGGTGCTTTGAGGGTTGGTCGTAGGTTACCGGCAAAATTTGGTTTGTACCGGCCGGATTCACACATTGGTTTGGGAATTGGGCACCCAATCATTCGTTCCCAAAACGCATTGGTGAAGAAAGGTGAATCATTCTTCTCCAAATTCACAATGGATTTCCCTCCATACTGTCGATCCCAATTGCGTAGCAACACTTACCGTGCCCTCGTTCACCTCCTCTCTCACATTTCTGCTTACAACGCTTCAATTCTTGAAGCTTCAACTCAACCCGTCAACATTCCCGATAATGGCAGTGGTAGAATGGATCAAGAAAACCAGGAAAAGGAGCCTAAGTGCTCCGAAGTTGTTGATTCTGATTTTTTGGATCCCAAGGATCCTATATGCCAGAAGGATATACCGGAGGTCCAGGAAACCATTGAGGGGGTTGAAGACAAGGATATGGATTTTACTTCTAACAAGATGGTCCTAGATGATATAGAACATATGATGGGAATAGAGGACTTGTCTACCCTAGCAAATGGTTTTGATAAGGAGCAAAAGCTAATGAATGAGTTTGAGCAGGTTATGAAAGGAACTGAGGATCTTATTTGTGATAGTGAATTAATCCCCTTGAACTTGGAATTGGATAAGACACGTAGTGATGGTGGTGAAGTTGAGTTGATGGATTACCAATCAGAAGTGGAGGAAGGAGAAATTTCTGGAGACTTGGGAATAGATGGCAATTTATTTGATGTGGCTTCTGCAGATGCTTTAATATTACGACAGATGGAAGTAGATGAGGTTCAGAAGCCTGAAAATGTAACTGGAAACATGATATATCCTTCTAAGATTGAGAATCAAGAAAAGGAAAAAGGCTATGACTCTAAATCCTCTTTGGTAAATGCATTTCAAGATTACAATAATAATGGACAAGTGGAGCCTAGAACTAGTGGCAAGAAAGGGATTGTATGTGGAGTTGAAGTAGCAATTTCTAAAGAAACTATTGAATGTCAGAAGGAAGATAAAACAAAGTTGGATAATGCCAGTAAAAAGAATAAGCGTGGTGGGAACAAAGGAAAAAAGAAGAAAGCAGATAGAAAGAAGAGAGCAGAAAAGAACAAACAACTAGGTGTTAAAAGATTGCAGTTACAGCATGTGCAGAAACCAAAAGTTGTCTCACATTGTCGTCATTATCTCAATGGAAGGTGCCATGAGGGTGACAAGTGTCAGTTTTCACATGATGTAGTGCCTCTAACAAAATCCAAGCCGTGTACTCACTTTGCTCGTCACTCTTGCATGAAAGGGGATGATTGCCCATTTGATCACCAGCTCTCAAAATATCCTTGTACCAATTTTGTGTCCAAAGGCTCTTGTTATAGAGGTGATGCTTGCTTGTTTTCTCACCAGGTATCAACGAAAGAAGACATCCCTACAGCTTCAAATATGTGCAGACCAGAGTTGTCTCCACTTCTGTCTGGAAATGCAAATTCCAGCACACCACTTAACAACAATCATGGCTCTACTCCTGTCCAGCAAAACCACTTAACTAATTCTGCAGGAATTCATTTTTGCACCAGTGTTGAACATAAAGTGACAAACACTGTACAGAAACAGCCTACACCACCTAAAGGAATTAGTTTCATCAATCTTGCTAAATTATCACCCAGCCTTAGTTCTCTGAAACAAAGCACAGTAACAACCAAGGGAAGTCCTGTACAAATTGGGACCCGTGAAGATCAAAGTTCATTTCACAAAACTCAAAACAAGGTGGACATTCCTAAGAAATTGCCAGCTGTGACACCTAAGGGAATAAACTTTCTTTCTTTTGGCAAAGGCTCTGTCTGCAGTTTTAAAAGTGTGAATAGGGAAAACGGTATCAAGTTGCCTCAGTTATTCAATTTTGGTTTGCCTGAGCAGGAAAAATCCTCTCTAAACAAAGATGATTACAACAAAGCTAGTGACACCACAAAACAAAATGCACCACAGACTGATATATTCTTAACTGAGATTTTAGGAAAAAATCAATCTGTGGCAGAAGAAATGAAATTAAAACTTCCAGAGAAAACCTCCGTAGATTTTTTTATGAGGGATCACAGCCATAGTAAATCAGTTCAAGAGGGGAAGAAGTCATCTGATAATTCTCAAAGTTCAAAGGGCCAAAAGGCACTCTTATCAACTCTAGCATTTGCAGCTGAGCATGAATCTAGCATTAAGATGAAATACCCTACTGGTGGTTTGCCGATGTCATCAGAGGACTCAGAGAGAATGTTTTGTTGA 2748 0.4036 MASKFSFLTLLMERRKPSKDNNNNNNDLAFVKAAAWAWYQHNSGSKGKTISEFDATITRRVPRPSRYKLEAMRIMAQEAPSEGSPTIRAKKLSLLDEYEVQSISRQLSGLVAEDSKSNNDNKHNKLFKGADNSTNRRTTKKKKVRKGFWLGHGAVCGREEDVVDPGALRVGRRLPAKFGLYRPDSHIGLGIGHPIIRSQNALVKKGESFFSKFTMDFPPYCRSQLRSNTYRALVHLLSHISAYNASILEASTQPVNIPDNGSGRMDQENQEKEPKCSEVVDSDFLDPKDPICQKDIPEVQETIEGVEDKDMDFTSNKMVLDDIEHMMGIEDLSTLANGFDKEQKLMNEFEQVMKGTEDLICDSELIPLNLELDKTRSDGGEVELMDYQSEVEEGEISGDLGIDGNLFDVASADALILRQMEVDEVQKPENVTGNMIYPSKIENQEKEKGYDSKSSLVNAFQDYNNNGQVEPRTSGKKGIVCGVEVAISKETIECQKEDKTKLDNASKKNKRGGNKGKKKKADRKKRAEKNKQLGVKRLQLQHVQKPKVVSHCRHYLNGRCHEGDKCQFSHDVVPLTKSKPCTHFARHSCMKGDDCPFDHQLSKYPCTNFVSKGSCYRGDACLFSHQVSTKEDIPTASNMCRPELSPLLSGNANSSTPLNNNHGSTPVQQNHLTNSAGIHFCTSVEHKVTNTVQKQPTPPKGISFINLAKLSPSLSSLKQSTVTTKGSPVQIGTREDQSSFHKTQNKVDIPKKLPAVTPKGINFLSFGKGSVCSFKSVNRENGIKLPQLFNFGLPEQEKSSLNKDDYNKASDTTKQNAPQTDIFLTEILGKNQSVAEEMKLKLPEKTSVDFFMRDHSHSKSVQEGKKSSDNSQSSKGQKALLSTLAFAAEHESSIKMKYPTGGLPMSSEDSERMFC 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02077 915 Gene3D - 577 640 - -
Gma14g02077 915 ProSiteProfiles Zinc finger C3H1-type profile. 546 573 IPR000571 GO:0046872
Gma14g02077 915 MobiDBLite consensus disorder prediction 116 137 - -
Gma14g02077 915 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 383 908 IPR045124 GO:0003723|GO:0045892
Gma14g02077 915 PANTHER PROTEIN SUPPRESSOR OF SABLE 383 908 - -
Gma14g02077 915 SUPERFAMILY CCCH zinc finger 547 571 IPR036855 GO:0046872
Gma14g02077 915 SMART c3hfinal6 575 601 IPR000571 GO:0046872
Gma14g02077 915 SMART c3hfinal6 603 627 IPR000571 GO:0046872
Gma14g02077 915 SMART c3hfinal6 545 572 IPR000571 GO:0046872
Gma14g02077 915 MobiDBLite consensus disorder prediction 719 744 - -
Gma14g02077 915 MobiDBLite consensus disorder prediction 113 140 - -
Gma14g02077 915 MobiDBLite consensus disorder prediction 896 915 - -
Gma14g02077 915 ProSiteProfiles Zinc finger C3H1-type profile. 575 602 IPR000571 GO:0046872
Gma14g02077 915 MobiDBLite consensus disorder prediction 511 526 - -
Gma14g02077 915 MobiDBLite consensus disorder prediction 855 876 - -
Gma14g02077 915 Pfam CCCH-type zinc finger 551 571 IPR041367 -
Gma14g02077 915 Gene3D - 518 576 - -
Gma14g02077 915 MobiDBLite consensus disorder prediction 497 533 - -
Gma14g02077 915 MobiDBLite consensus disorder prediction 253 275 - -
Gma14g02077 915 ProSiteProfiles Zinc finger C3H1-type profile. 605 628 IPR000571 GO:0046872
Gma14g02077 915 MobiDBLite consensus disorder prediction 719 738 - -
Gma14g02077 915 SUPERFAMILY CCCH zinc finger 604 631 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02077 Gma-Chr14 51902147 51910832 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma14g02077 zf-CCCH_4 4.3e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02077 - - gmx:100816509 1378.23