Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02071 ATGACGGGGAAGAAGAATGTGAAGGCGGCGACAACCACGACACCGGAAGAGGAAGACCAGAGGAAGCAAACGACGACGTCGTCTTCCCCCTCGTCGTCTTCGCGCTCCTCCTCCTCGTCGTCGTCTTCGGATGAGAGAGAGTACGAGGTGCAGGACCTGCGTGACCGGTTGAAATCGTCGCGAGGGAGCAGGTTCGATCTCATAGAGAACCAGTTGGGACTCAACTCGACTTGGAGCAAGTTCAGTCGCCAAGCGCTTCTCCATGGAATCCGAGGCTTCTCCGTGGACTTCGTTATTCATCCTGATAACAGGTGGTATCGGGCATGGACAAAATTCATATTGCTATGGGCAGTGTATTCATCCTTCTTCACCCCAATGGAGTTTGGGTTTTTCCGTGGCCTGCCTGAGAATCTCTTTATTCTGGACATCATTGGACAAATAGCTTTTCTTGTAGATATTGTCTTGCAATTTTTTGTTGCTTATAGAGATAGTCAGACCTATCGTACGGTCTACAAGAGAACCCCTATTGCTCTGCGGTATCTGAAATCTAACTTCATATTTGATCTTCTTGGATGTATGCCCTGGGACATCATCTACAAGGCTTGTGGAAGAAAAGAGGAAGTGAGATACCTTTTGTGGATCAGACTATATAGGGTTCGGAAAGTCACAGATTTTTTCCACAAGTTGGAGAAGGACATACGTGTCAATTACATTATTACCCGGATTGTGAAACTGATAGTAGTTGAACTCTATTGCACCCATACAGCAGCCTGCATTTTCTACTATTTGGCTACCACACTACCTGAATCCCAAGAAGGGTACACATGGATAGGAAGTTTAAAACTAGGTGACTTTAGTTATTCACATTTCAGAGAAATTGATCTTTGGAAGCGCTATACAACATCTCTGTACTTCGCTATTGTTACAATGGCTACAGTTGGCTATGGAGATATACATGCAGTAAATATGAGGGAGATGGTATTCATAATGGTGTATGTTTCATTTGATATGATTCTTGGTGCCTATTTGATTGGTAACATGACAGCTTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAAGATGACAGACCTTATGAAATATATGAACAGAAATAGGCTTGGAAGGGATATCCGTGAACAAATTAAGGGCCATGTGCGGTTACAGTATGAGAGTAGCTACACTGAGGCTTCTGTCATTCAGGATATCCCTATATCTATTCGAGCTAAGATATCCCAAACATTATATTTGCCGTACATTGAAAAGGTTTCTCTTTTTAAGGGATGCTCTTCTGAATTCATCCGTCAGATTGTTATTAGGCTCCATGAGGAGTTCTTTCTTCCAGGGGAAGTTATAATGGAACAAGGAAATGTTGTGGATCAACTATATTTTGTCTGCCATGGAGTACTGGAGGAAGTAGGCACTGCTGAAGATGGGACTGAAGAAACTGTTTCACTTCTGCAGCCTAACAGTTCATTCGGAGAAATATCTATTCTTTGCAACATTCCTCAACCATATACTGTCCGTGTTTGTGAACTGAGTAGACTCCTGCGACTTGATAAACAATCATTTACAAATATCCTAGACATATACTTTTATGATGGAAGGAAAGTATTAAACAACCTTCTAGAGGGAAAAGAATCTTTTCGAGATAAGCAGTTGGAGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAGCTTGCTTTGAAGGTCAATAATGCAGCTTTCAATGGGGATCTGTATCAGCTAAAAGGTTTAATTCGCGCTGGAGCTGATCCCAACAAGACAGATTATGATGGAAGGTCACCTTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACTTTTCCTTATTCAAGAACGTGTAGATGTCAATATTAAAGATAACTTCGGGAACACACCCTTACTTGAAGCAGTTAAGAATGGACATGATCGGGttgcttctttacttgttagagaaggggcctctatgaagattgaaaatgctggtagttttttgtgtactgcagttgcaaggggagattcagattatcttaaaagacttttatccaatggcatggatcctaacttaaaagattatgattaccgaagtcctcttcacattgctgcagctgaaggtttatatttcatggcaaagttgctattagaaggaggagctagtgtttttaccaaagacagatggggaaatacgccgcttgatgaagctcggatgtgtggaaataagaacctgatcaagcttctggaagatgcaaaatctgctcaactgtcagaattcccatcccaagaatatacagAcaaaatgcatccaaagaagtgcacagtgttcccttACCACCCGTGGGATCCGAAAGATAATAGAAGACATGGAATTGTATTATGGATTCCACACTCCATACAAGAGCTAATCAAATCAGCGGCAGAACAAATAGAATTTTCTGGCGATGCTTGTATTTTATCAGAAGATGCTGGTAAAGTTACTGATGTGGACATGATCAAGGATGGTCAGAAGCTGTATTTAGTCCATGAAACACATTAG 2553 0.3533 MTGKKNVKAATTTTPEEEDQRKQTTTSSSPSSSSRSSSSSSSSDEREYEVQDLRDRLKSSRGSRFDLIENQLGLNSTWSKFSRQALLHGIRGFSVDFVIHPDNRWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRTVYKRTPIALRYLKSNFIFDLLGCMPWDIIYKACGRKEEVRYLLWIRLYRVRKVTDFFHKLEKDIRVNYIITRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDFSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMVFIMVYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHVRLQYESSYTEASVIQDIPISIRAKISQTLYLPYIEKVSLFKGCSSEFIRQIVIRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGTAEDGTEETVSLLQPNSSFGEISILCNIPQPYTVRVCELSRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRDKQLESDITFHIGKQEAELALKVNNAAFNGDLYQLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITLFLIQERVDVNIKDNFGNTPLLEAVKNGHDRVASLLVREGASMKIENAGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLYFMAKLLLEGGASVFTKDRWGNTPLDEARMCGNKNLIKLLEDAKSAQLSEFPSQEYTDKMHPKKCTVFPYHPWDPKDNRRHGIVLWIPHSIQELIKSAAEQIEFSGDACILSEDAGKVTDVDMIKDGQKLYLVHETH 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02071 850 PANTHER POTASSIUM CHANNEL SKOR-LIKE 40 849 - -
Gma14g02071 850 SUPERFAMILY cAMP-binding domain-like 355 544 IPR018490 -
Gma14g02071 850 ProSiteProfiles Ankyrin repeat profile. 667 699 IPR002110 GO:0005515
Gma14g02071 850 MobiDBLite consensus disorder prediction 1 48 - -
Gma14g02071 850 Gene3D Jelly Rolls 411 550 IPR014710 -
Gma14g02071 850 Gene3D - 560 668 IPR036770 -
Gma14g02071 850 Pfam Cyclic nucleotide-binding domain 447 531 IPR000595 -
Gma14g02071 850 Gene3D - 669 764 IPR036770 -
Gma14g02071 850 ProSiteProfiles Ankyrin repeat profile. 636 668 IPR002110 GO:0005515
Gma14g02071 850 ProSiteProfiles KHA domain profile. 777 850 IPR021789 -
Gma14g02071 850 SMART ANK_2a 733 763 IPR002110 GO:0005515
Gma14g02071 850 SMART ANK_2a 603 632 IPR002110 GO:0005515
Gma14g02071 850 SMART ANK_2a 667 696 IPR002110 GO:0005515
Gma14g02071 850 SMART ANK_2a 636 665 IPR002110 GO:0005515
Gma14g02071 850 SMART ANK_2a 700 729 IPR002110 GO:0005515
Gma14g02071 850 Pfam KHA, dimerisation domain of potassium ion channel 776 845 IPR021789 -
Gma14g02071 850 Pfam Ankyrin repeats (3 copies) 577 666 IPR002110 GO:0005515
Gma14g02071 850 Pfam Ankyrin repeats (3 copies) 673 754 IPR002110 GO:0005515
Gma14g02071 850 Gene3D Helix hairpin bin 354 410 - -
Gma14g02071 850 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515
Gma14g02071 850 PRINTS Ankyrin repeat signature 604 619 IPR002110 GO:0005515
Gma14g02071 850 PRINTS Ankyrin repeat signature 716 730 IPR002110 GO:0005515
Gma14g02071 850 ProSiteProfiles Ankyrin repeat region circular profile. 603 635 - -
Gma14g02071 850 Pfam Ion transport protein 107 352 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma14g02071 850 Gene3D - 109 353 - -
Gma14g02071 850 CDD CAP_ED 427 541 IPR000595 -
Gma14g02071 850 SMART cnmp_10 427 545 IPR000595 -
Gma14g02071 850 PRINTS EAG/ELK/ERG potassium channel family signature 142 152 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma14g02071 850 PRINTS EAG/ELK/ERG potassium channel family signature 251 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma14g02071 850 PRINTS EAG/ELK/ERG potassium channel family signature 299 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma14g02071 850 PRINTS EAG/ELK/ERG potassium channel family signature 343 352 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma14g02071 850 SUPERFAMILY Ankyrin repeat 576 755 IPR036770 -
Gma14g02071 850 SUPERFAMILY Voltage-gated potassium channels 100 352 - -
Gma14g02071 850 ProSiteProfiles cAMP/cGMP binding motif profile. 427 547 IPR000595 -
Gma14g02071 850 ProSiteProfiles Ankyrin repeat region circular profile. 636 667 - -
Gma14g02071 850 ProSiteProfiles Ankyrin repeat profile. 700 732 IPR002110 GO:0005515
Gma14g02071 850 ProSiteProfiles Ankyrin repeat region circular profile. 700 732 - -
Gma14g02071 850 PANTHER POTASSIUM CHANNEL AKT1 40 849 IPR045319 GO:0005249|GO:0006813
Gma14g02071 850 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02071 Gma-Chr14 51848192 51858597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02071 674 753 Ion Channels AT5G37500 35.294 1.20e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02071 K21867 - gmx:100814385 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02071 14 51848192 51858597 Gma02g02301 02 49063965 49073408 GST