Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02053 ATGTCCAAAATGTTGGCACTCACAGTATCCATTATCCTCATCATCACACTCTCTTCTTCGCCATTAGTCACCTCTCACTACTCCTCTCCTTCTCTAGAAGCCTCGCCGACCTTCTCCGAATGGCGATCCGCGCGCGCCACCTACTACGCCCCGGCGGATCCCCGCGACGTGGTGGGCGGCGCGTGCGGCTACGGCGACCTGGTCAAGGGCGGCTATGGCATGGCCACTGTGGGCCTCAGCGAGGCGCTGTTCGAGCGCGGCCAGATCTGCGGCGCGTGCTTCGAACTCCGCTGCGTCGAGGACATGCGCTGGTGCATCCCTGGCACCTCCATCATCGTCACCGCCACCAACTTCTGTGCCCCCAACTACGGCTTCACCTCCGACGGCGGCGGACACTGCAACCCTCCCAACAAACACTTCGTTCTCCCCATCGAAGCTTTTGAGAAGATCGCCATTTGGAAAGCCGGCAACATGCCCGTGCAGTATCGCAGGATAAAGTGTAGGAAGGAAGGAGGGATGCGATTTACGGTTACTGGTTCTGGAATCTTCATCTCCGTGCTGATCAGCAATGTTGCTGGCCATGGAGACGTAGTGGAGGTGAAGGTTAAAGGCTCGAGAACTGGTTGGCTTTCAATGGGTCGGAATTGGGGACAAAACTGGCATGTAAATGCGTTGCTGCAAAATCAACCCCTTTCGTTTGAGGTTAAAGCCAGTGATGGAAAAACGGTTACGTCTTACAATGTTGCTCCCAAGGATTGGACCTTTGGACAAACCTTCGAAGGCAAGCAATTTGAGACTTGA 801 0.5543 MSKMLALTVSIILIITLSSSPLVTSHYSSPSLEASPTFSEWRSARATYYAPADPRDVVGGACGYGDLVKGGYGMATVGLSEALFERGQICGACFELRCVEDMRWCIPGTSIIVTATNFCAPNYGFTSDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGMRFTVTGSGIFISVLISNVAGHGDVVEVKVKGSRTGWLSMGRNWGQNWHVNALLQNQPLSFEVKASDGKTVTSYNVAPKDWTFGQTFEGKQFET 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02053 266 Gene3D - 172 264 IPR036749 -
Gma14g02053 266 SUPERFAMILY Barwin-like endoglucanases 34 190 IPR036908 -
Gma14g02053 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 261 IPR007117 -
Gma14g02053 266 PANTHER EXPANSIN-A15 17 265 IPR002963 GO:0009664
Gma14g02053 266 Pfam Expansin C-terminal domain 173 250 IPR007117 -
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 80 98 IPR007118 GO:0005576
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 155 171 IPR007118 GO:0005576
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 209 223 IPR007118 GO:0005576
Gma14g02053 266 PRINTS Expansin/Lol pI family signature 247 261 IPR007118 GO:0005576
Gma14g02053 266 Gene3D - 26 168 IPR036908 -
Gma14g02053 266 PANTHER EXPANSIN-A13 17 265 - -
Gma14g02053 266 SUPERFAMILY PHL pollen allergen 169 261 IPR036749 -
Gma14g02053 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 172 IPR007112 -
Gma14g02053 266 Pfam Lytic transglycolase 77 162 IPR009009 -
Gma14g02053 266 PRINTS Expansin signature 71 85 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 98 109 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 111 121 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 130 147 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 147 160 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 171 183 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 183 204 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 218 239 IPR002963 GO:0009664
Gma14g02053 266 PRINTS Expansin signature 247 263 IPR002963 GO:0009664
Gma14g02053 266 SMART dpbb_1 76 162 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02053 Gma-Chr14 51637689 51639958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02053 40 266 Expansin Gene Family AT3G03220 84.581 2.60e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02053 - - gmx:100809568 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02053 14 51637689 51639958 Gma02g02277 02 48837601 48839332 GST
Gma18g00417 18 3842939 3845947 Gma14g02053 14 51637689 51639958 PCT
Gma11g02149 11 36515961 36516539 Gma14g02053 14 51637689 51639958 PCT
Gma14g02053 14 51637689 51639958 Gma18g00417 18 3842939 3845947 PCT
Gma14g02053 14 51637689 51639958 Gma11g02149 11 36515961 36516539 PCT