Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02047 ATGGAGCAGGAACACCCAAACCTTGAAAGCTTCTTATCATGGGCAGCACAGCTTGGAATATCAGACTCAACAACACGCACCAACCAACCTCAGCACTCTCTTTCCTCATGTTTGGGTTCTTCTCTATCTGTCTCTCATTTTCCTCATTCTGGCGGGAGAGGTTTGGGTGCTGTGAGAGACCTTAGGAGGGGAGAGATTGTTCTCAGAGTTCCAAAATCTGCTTTAATGACAAGAGAGACTGTTATGGAAGATAAAAAGCTCTGTGATGCTGTCAATAGACACTCTTCTCTCTCCTCAGCTCAGATATTGATTGTTTGCTTGTTGTATGAAATGGGTAAAGGAAAGACTTCAAGGTGGCATCCTTACCTCATGCATTTGCCACACACTTATGACGTACTAGCCATGTTTGGTGAATTTGAGAAGCATGCTCTGCAAGTGGATGAGGCAATGTGGGTCACAGAAAAAGCCATGCTTAAAGCCAAATCAGAGTGGAAAGAAGCTCATTCTCTGATGCAAGATCTCATGTTTAAGCCTCAGTTTTTTACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCCCGGACATTGCATATCCCGTGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAATAGAACCATCTGGCATTGAGGATTTAGATCGTTTGCTATCTAACACTTCCATCCCTGATACTATCGTATTGAATGGAGACAAGAATATTATGGTAGATGCAGAACAGCTTGATTCACACTCTTGGAGATTAACAGATGGCGGGTTTGAGGAAGATGCTAATGCATATTGCTTTTATGCTAGGGAACATTACAAGAAAGGAGATCAGGTTCTATTATGCTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGGTTTCTCCTACAAGAAAATCCAAATGACAAAGTTTTTATCCCTTTGGAACCTGCTTTATATTCTTCCACTTCATGGTCTAAGGAATCACTCTATATCCATCACAATGGGAAGCCTTCCTTTGCACTACTAGCTGCATTGCGGCTGTGGGCAACCCCTCAAAACAGGAGGAGGTCAGTTGGACATCTTGTGTATTCTGGTTCTCGAGTTTCTACAGACAATGAAATTTTCATCATGAAATGGCTGTCAAAAACTTGTGATGCTGTGTTAAGGAATCTGCCAACATCTCTTGAGGAAGACACTTTGCTCCTCAATGCAATGGACAATAGTCAAGATTTTTCAACTTTCATGGAGATCACAAAGTTAGTGTCTTCCAGAGAGGAGACTTATACCTTCTTAGAAACGCATAATATGAAGGATACTCATAGTTTTACTGATGTAATTTTATCTAGAAAAGCAAGAAGGTCCATGGACAGGTGGAAATTAGCTGTTCAATGGAGGCTCAAGTATAAGAAAGTCATTTTTGATTGCATCTCTTATTGCAACAAAATACTGGATTCTTTAGTAAAATAA 1494 0.4096 MEQEHPNLESFLSWAAQLGISDSTTRTNQPQHSLSSCLGSSLSVSHFPHSGGRGLGAVRDLRRGEIVLRVPKSALMTRETVMEDKKLCDAVNRHSSLSSAQILIVCLLYEMGKGKTSRWHPYLMHLPHTYDVLAMFGEFEKHALQVDEAMWVTEKAMLKAKSEWKEAHSLMQDLMFKPQFFTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGIEPSGIEDLDRLLSNTSIPDTIVLNGDKNIMVDAEQLDSHSWRLTDGGFEEDANAYCFYAREHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKVFIPLEPALYSSTSWSKESLYIHHNGKPSFALLAALRLWATPQNRRRSVGHLVYSGSRVSTDNEIFIMKWLSKTCDAVLRNLPTSLEEDTLLLNAMDNSQDFSTFMEITKLVSSREETYTFLETHNMKDTHSFTDVILSRKARRSMDRWKLAVQWRLKYKKVIFDCISYCNKILDSLVK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02047 497 Pfam Rubisco LSMT substrate-binding 344 480 IPR015353 -
Gma14g02047 497 Gene3D - 309 497 IPR036464 -
Gma14g02047 497 SUPERFAMILY SET domain 6 314 IPR046341 -
Gma14g02047 497 CDD SET_LSMT 51 310 - -
Gma14g02047 497 ProSiteProfiles SET domain profile. 40 296 IPR001214 GO:0005515
Gma14g02047 497 Gene3D set domain protein methyltransferase, domain 1 5 308 - -
Gma14g02047 497 PANTHER PROTEIN SET DOMAIN GROUP 40 4 482 - -
Gma14g02047 497 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 482 - -
Gma14g02047 497 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 306 418 IPR036464 -
Gma14g02047 497 Pfam SET domain 52 296 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02047 Gma-Chr14 51594361 51597968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02047 52 338 NAC Transcription Factor Family AT3G56570 23.392 5.75e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma14g02047 SET 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02047 - - gmx:100787452 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02047 14 51594361 51597968 Gma02g02271 02 48796528 48800993 GST