Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02038 ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGCGCGGGTCCCTTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTATTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCCACAACCAACAGAGAAGTTGATGGTCACATACCCAATTACCCGAGTTTGCCGCCACAGTTGGTTTGCCAACTTCACAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACGTTGCAGCCATTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCCATGGAGTTGGGCGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACGTTAACGGCAAGTGACACCAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCTGCTGAGAAAGTTTTCCCTCCATTGGATTTCTCACAGCAACCACCTGCGCAAGAACTAATTGCTAGGGATCTCCATGACGTTGAGTGGAAGTTTCGACATATTTTTCGAGgacagccaaaacgacaccttcttacaacaggctggagtgtatttgttagtgccaaaagactagtggctggagatTCTGTGCTTTTCATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCGACCACAAACTGTCATGCCATCGTCAGTTCTATCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCTGCTCATGCCGCAGCAACTAATAGCTGCTTTACAGTGTTCTATAACCCAAGGTTGGCTAGTCCATCTGAGTTTGTCATTCCGCTTTCAAAATATATCAAAGCTGTGTACCATACACGCGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACAATAACTGGCATAAGTGACCTTGATCCTGTTCGTTGGCCGAATTCTCATTGGCGGTCTGTTAAGGTTGGTTGGGATGAATCGACAGCAGGAGAGAGACAGCCTCGGGTATCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCTCTATTTCCCCTCAGATTGAAACGGCCATGGCATCCTGGCACCTCTTCTTTTCATGATGGCAGAGATGAAGCAACTAATGGGCTTATGTGGCTAAGGGGTGGACCTGGAGACCAAGCTCTCAATTCCCTGAATTTTCAAGGTTCTGGTTTGTTGCCATGGATGCAGCAGAGAATGGATCCAACATTACTTGGAAATGATCATAATCAGCAATACCAAGCCATGTTTGCATCTGGTTTGCAGAACTTAGGGAGTGGAGATTTAATGAGACAACAAATGATGAATTTTCAACAGCCTTTCAATTATCTTCAACAATCAGGAAACCCCAATCTTCCTTTGCAGCTTCAGCAACCGCAAGCAGTTCAGCAATCTGTATCTTCTAATAATATCCTACAGCCACAAGCCCAAGTGTTGGCAGAGAACTTGTCTCAGCACCTCCAGAAATCACACAACAATCGAGAAGACCAAACACAGCAGCAGCAGCACACTTATCAAGATACGGTTTTACTTCAAAGTGATCAGCTCCATCAGAGGCAACACTCTGGTTTACCTTCACCGTCATATTCAAAACCGGATTTCTTAGATTCAAGCATGAAGTTCCCTGCTTCAGTTTCGCCAGGACAAAACATGCTTGGTTCACTTTGTCCCGAAGGGAGTGGCAATCTCTTGAATTTATCCAGAAGTAGTCAGTCCATGTTGACTGAACAGTTACCTCAACAATCATGGGCCCCAAAGTTCACACCATTGCAGATTAATGCTTTTGGCAACTCAATGCAACATGTGCAGTATTCTGGAAAAGATACTGCAATGGTGCCACCACATTGTAACCCAGACTCCCAAAATCCTATTCTATTTGGGGTCAACATTGATTCATCTGGCCTTCTGCTTCCTACGACTGTTCCTCGTTATACTACTGCATCAGCTGAAATTGATGCATCAGCAATGCCAATAGGAGAGTCTGGATTCCAGTCTCCTCTATATCCTTGCGTGCAAGATTCATCAGAGTTGGTGCAAAGTGCAGGGCAAGTCGACCCTCAAAACCAGACACGAACATTCGTCAAGGTTTACAAATCAGGGTCAGTAGGGCGCTCACTTGACATCTCCCGGTTCAGCAGTTATCATGAGCTGCGGGAGGAGTTGGCACAGATGTTTGGTATTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTTGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTATGGTATATCAAAATACTTTCACCTGAAGATATCCATAAAATGGGAGAACAAGCCGTGGAATCCCTTGGTCCAAGTTCAGGACATAGGCTGAATAGCACTGGTGCAGATTCTCACGAAATTGTTTCTGGACTTCCATCAATTGGCTCCCTTGAATACTGA 2535 0.4394 MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRLASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPTLLGNDHNQQYQAMFASGLQNLGSGDLMRQQMMNFQQPFNYLQQSGNPNLPLQLQQPQAVQQSVSSNNILQPQAQVLAENLSQHLQKSHNNREDQTQQQQHTYQDTVLLQSDQLHQRQHSGLPSPSYSKPDFLDSSMKFPASVSPGQNMLGSLCPEGSGNLLNLSRSSQSMLTEQLPQQSWAPKFTPLQINAFGNSMQHVQYSGKDTAMVPPHCNPDSQNPILFGVNIDSSGLLLPTTVPRYTTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIHKMGEQAVESLGPSSGHRLNSTGADSHEIVSGLPSIGSLEY 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02038 844 Pfam Auxin response factor 254 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma14g02038 844 MobiDBLite consensus disorder prediction 543 562 - -
Gma14g02038 844 MobiDBLite consensus disorder prediction 543 560 - -
Gma14g02038 844 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 829 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma14g02038 844 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Gma14g02038 844 SMART B3_2 128 230 IPR003340 GO:0003677
Gma14g02038 844 CDD B3_DNA 127 228 IPR003340 GO:0003677
Gma14g02038 844 ProSiteProfiles PB1 domain profile. 718 802 IPR000270 GO:0005515
Gma14g02038 844 PANTHER AUXIN RESPONSE FACTOR 1 829 - -
Gma14g02038 844 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Gma14g02038 844 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Gma14g02038 844 Gene3D - 293 365 - -
Gma14g02038 844 Gene3D - 126 229 IPR015300 -
Gma14g02038 844 Pfam AUX/IAA family 714 802 IPR033389 -
Gma14g02038 844 Gene3D - 714 807 - -
Gma14g02038 844 SUPERFAMILY CAD & PB1 domains 716 792 - -
Gma14g02038 844 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02038 Gma-Chr14 51498662 51505927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02038 98 815 B3 DNA Binding Superfamily AT5G37020 67.901 0.0 925
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma14g02038 AUX_IAA 7.1e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02038 - - gmx:100784804 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02038 14 51498662 51505927 Gma02g02264 02 48725969 48736520 GST
Gma18g00436 18 4138607 4145527 Gma14g02038 14 51498662 51505927 PCT
Gma11g02076 11 34761811 34768509 Gma14g02038 14 51498662 51505927 PCT
Gma14g02038 14 51498662 51505927 Gma18g00436 18 4138607 4145527 PCT
Gma14g02038 14 51498662 51505927 Gma11g02076 11 34761811 34768509 PCT