Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02014 ATGTCCGTACACGCAAAACTGAAGCACCACCCCATGAACCTAGCATCCCCAAGTTCCCATTTTGAGGACGACCCACCATGCAAAACCAAGACCAAAACCCAAAGGAGGCTCCTTCGGATCATAATCACCGACCATGACGCCACCGATTCTGACTCCTCCGACGAAGAACAACAGCAGCAGCAACAAAAAACAAGAAGAGTGAACAGAGAAATCACCCAAATCAACATGCAACTTCCTCTATCACATAATAGTTCCTTTTCCCCTTCATCTTCTTATTACTCTTCAGCTTCCACCTCATCGGAACAAAACCTAAAGTGCAAGAGACCCAACAAAAAGCCGCCACCTTCCTCCGCCGAGGCCCGCCGCCGCAACAAGTTCCGCGGCGTCCGGCAGCGGCCGTGGGGGCGGTGGGCGGCCGAGATCCGCGACCCCACCCGCCGGAAACGCCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCCGCCACGGAGTACGACAGAGCCGCCGTCAAACTCAAGGGCCCCAACGCCGTCACCAACTTCCCCCTCGCGCCGGAGGCTACGGCGCAGTCTCCACCGCTCGCCGCGGACAACCTCAGCTCCGACGGCGGCGCGTCGTACTCGGACCTAGTGGCCTCGCCGACGTCCGTCTTGGCCTACGAGTGCGACTCGACGCCGTTCGACGGTTTCCGTTATCTCGACGTTGACGCGTTCGGGTTCCACATCGACGCGCCGTTAAGTTTGCCGGAAGTTAACGTTAACGTTGCGCTGACGTGTCATCACGGGAAGAAGCAGGAGGAGGCGTTTGATGAATTCGATCTGGACGAGTTCATGACGTGGCCTTACTAG 849 0.5795 MSVHAKLKHHPMNLASPSSHFEDDPPCKTKTKTQRRLLRIIITDHDATDSDSSDEEQQQQQQKTRRVNREITQINMQLPLSHNSSFSPSSSYYSSASTSSEQNLKCKRPNKKPPPSSAEARRRNKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPLAPEATAQSPPLAADNLSSDGGASYSDLVASPTSVLAYECDSTPFDGFRYLDVDAFGFHIDAPLSLPEVNVNVALTCHHGKKQEEAFDEFDLDEFMTWPY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02014 282 MobiDBLite consensus disorder prediction 105 124 - -
Gma14g02014 282 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Gma14g02014 282 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Gma14g02014 282 MobiDBLite consensus disorder prediction 23 48 - -
Gma14g02014 282 SUPERFAMILY DNA-binding domain 125 183 IPR016177 GO:0003677
Gma14g02014 282 MobiDBLite consensus disorder prediction 1 129 - -
Gma14g02014 282 PIRSF PTI6 8 282 IPR017392 GO:0003700
Gma14g02014 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 30 224 - -
Gma14g02014 282 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 224 - -
Gma14g02014 282 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Gma14g02014 282 MobiDBLite consensus disorder prediction 64 104 - -
Gma14g02014 282 CDD AP2 125 182 IPR001471 GO:0003700|GO:0006355
Gma14g02014 282 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Gma14g02014 282 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Gma14g02014 282 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02014 Gma-Chr14 51158193 51160033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02014 28 222 AP2-EREBP Transcription Factor Family AT4G27950 43.216 4.22e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma14g02014 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02014 K13434 - gmx:100800489 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02014 14 51158193 51160033 Gma02g02234 02 48391737 48392585 GST
Gma18g00480 18 4480588 4481660 Gma14g02014 14 51158193 51160033 PCT
Gma11g02030 11 34089788 34091311 Gma14g02014 14 51158193 51160033 PCT
Gma14g02014 14 51158193 51160033 Gma18g00480 18 4480588 4481660 PCT
Gma14g02014 14 51158193 51160033 Gma11g02030 11 34089788 34091311 PCT