Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02006 ATGGAGGTTGAGGTTTGCATGAACGTTTCGTGCAAGAATGGCTATGCGAGAGAATGGAAGAAGGGGTGGCCTCTGCGATCGGGTGGATTCGCTAGACTCTGCCACAAGTGCGGATCTGCCTATGAAAATTTAATTTTCTGTCAGAAATTTCACCTATATCAAACAGGGTGGAGAGAGTGTTCCTTTTGCAATAAGACTGTCCACTGTGGATGTATAGTATCAAGCTCTATGTTTGAGTACCTTGATTATGGAGGAATAGGTTGTGCTACCTGTGTGAAGACTTCACAACTTAATTTGATACGGGATACTAAAAACACTATTGGGTCTGTTAGATCAATAAAAAACAATGCACGCAATCGTCATACTGAACATATCGATGGTAGATTATTGGTGGACAGTGCTGGCAAAGGAAACCTTATGCTGTTGCGTAGAGATGTTGAAGCTAGTGAATCCATCCGTTGGCCTCGAGCAGAGAGAGATGGCATAGATTCATGTATTGGTCCAAACAGGCAAGAGGATAGAAGATTTTCAAATGTGGTGAAACTGTCTGGTCATTCATTAAATTTTACAACATTGGATCATAACAGACCAACATGGGAGACACAAACTATGCACAAATCAAGTTCACTGAATATGTCTCTTGGAACCTCATCAGGAAATTCTGTCCAGCCTTCTGCTTTGGACATTGCAGAAAGGAGACTTGAGGATAAAGCATCCTTTTGTCCCTTTCCTCAAGGGCAAAGATCTCTCTCCATATCTAAATCATTGATGGATGGGATAACCATGAATCTGGAAGATAGCAAAGGTGTGATTTCTCAGGAACGCGTTGCCCGGCCACCTGCTAATGGGAAACCCAAGAATCTGTTACATTTTCGATACTGGCCTAGGATTACAGGTCAAGAGCTGGAGAAATTGTCGGGAGATTTGAAGTCTACTATAGTGCCATTGTTTGAGAAGGTATTGAGTGCCAGTGATGCAGGTCGAATTGGTCGACTTGTTCTCCCAAAATCTTGTGCTGAGGCTTACTTTCCTCCTATTTCACAGTCAGAAGGTCTTCCTTTGCAGTTCAAAGATGTGAAGGGAAATGACTGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGTATGTATTGGAGGGAGTAACCCCTTGCATACAGGCCATGCAATTAAATGCTGGTGATATTGTAACATTTAGTCGGATAGATCCTGGAGGCAAATTTGTCATGGGTTACAGAAGGGCATCAGATTCTATGGATACACAAGTTGATGCCTCTACTTTTGCTCACTCCAATGGTTTTGCAACAAAGGAAGCAACCTTTTCTGGTGCAACTGCAAATCTGCACTCAGGAAAAAGTTATCCTGATCTTCTCCAGACAAGGAATGGAAATGGCGAACCTTACTTAAATGGATGTTCAGAACATTTGCGTTTTGGTACTGGAACTGCTGATTGTCTACAAACTGAAAATTGTGAGATGGTAAACAATGATTTGCTGCAGCAAACAATTTCAGTTTCTGAGAAGACTCTAAATATTGCACCAAAGAGTAAGAGGTTGCTGACACATAATGAAGATGCTGTGGAGTTGAGAATTACATGGGAAGAAGCACAAGACTTGCTTCATCCACCACCTAGTACCATGCCAAGTGTTGAAACAATTGAGGACAAAGAATTTGAGGAATTTGAGGAACCCCCGGTTTTTGGAAAGGGGACTACAATCAATGACCCCCCATCTGGGTCTTTGAGCTCTGCATCAGAGAAAATGAGTTCAATGGACTTAGAAAATATTCCAGTAACCAGCAAAGATTCTAAAAAGCGAAGAATTATGGAAAAACTTGATTCATCAGCTGGTGCCACAACCAAGCATCCAAGGCACTGTTCTGGATGCACTTGCATTCTGTGCATTCAGCCCCCAAGTGGAAAAGGAAGACATAAGCCAACATGCACGACCGTGAGGCGCCAATTCAAGACCCTTATGAAGCGTAAGAAGCAACGCGAATCAGATGCTACTCAAAATGATCAGATTCATCACAGTGATGAGGGAGATACCCATGGTGCATCAAGAGAGGGTGCAATTGCAAGTAACTTGGAGAATGAGGGAAGCCTCAACAGAATGGATGAACTCGGTACAGGACAAATAGACCTTAATAGTCATCCGGATCATGAATAA 2175 0.4234 MEVEVCMNVSCKNGYAREWKKGWPLRSGGFARLCHKCGSAYENLIFCQKFHLYQTGWRECSFCNKTVHCGCIVSSSMFEYLDYGGIGCATCVKTSQLNLIRDTKNTIGSVRSIKNNARNRHTEHIDGRLLVDSAGKGNLMLLRRDVEASESIRWPRAERDGIDSCIGPNRQEDRRFSNVVKLSGHSLNFTTLDHNRPTWETQTMHKSSSLNMSLGTSSGNSVQPSALDIAERRLEDKASFCPFPQGQRSLSISKSLMDGITMNLEDSKGVISQERVARPPANGKPKNLLHFRYWPRITGQELEKLSGDLKSTIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLQFKDVKGNDWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLNAGDIVTFSRIDPGGKFVMGYRRASDSMDTQVDASTFAHSNGFATKEATFSGATANLHSGKSYPDLLQTRNGNGEPYLNGCSEHLRFGTGTADCLQTENCEMVNNDLLQQTISVSEKTLNIAPKSKRLLTHNEDAVELRITWEEAQDLLHPPPSTMPSVETIEDKEFEEFEEPPVFGKGTTINDPPSGSLSSASEKMSSMDLENIPVTSKDSKKRRIMEKLDSSAGATTKHPRHCSGCTCILCIQPPSGKGRHKPTCTTVRRQFKTLMKRKKQRESDATQNDQIHHSDEGDTHGASREGAIASNLENEGSLNRMDELGTGQIDLNSHPDHE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02006 724 SUPERFAMILY DNA-binding pseudobarrel domain 314 416 IPR015300 -
Gma14g02006 724 SMART B3_2 317 417 IPR003340 GO:0003677
Gma14g02006 724 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 584 724 - -
Gma14g02006 724 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 582 - -
Gma14g02006 724 ProSiteProfiles B3 DNA-binding domain profile. 317 418 IPR003340 GO:0003677
Gma14g02006 724 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 584 724 - -
Gma14g02006 724 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 582 - -
Gma14g02006 724 MobiDBLite consensus disorder prediction 575 592 - -
Gma14g02006 724 CDD B3_DNA 315 416 IPR003340 GO:0003677
Gma14g02006 724 Gene3D - 295 422 IPR015300 -
Gma14g02006 724 MobiDBLite consensus disorder prediction 663 688 - -
Gma14g02006 724 MobiDBLite consensus disorder prediction 567 592 - -
Gma14g02006 724 MobiDBLite consensus disorder prediction 660 724 - -
Gma14g02006 724 Pfam B3 DNA binding domain 317 417 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02006 Gma-Chr14 51013161 51020464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02006 1 721 B3 DNA Binding Superfamily AT2G30470 40.201 4.63e-166 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma14g02006 B3 1.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02006 - - gmx:100799429 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02006 14 51013161 51020464 Gma02g02230 02 48299820 48307488 GST
Gma18g00486 18 4546098 4554180 Gma14g02006 14 51013161 51020464 PCT
Gma11g02020 11 33799023 33807474 Gma14g02006 14 51013161 51020464 PCT
Gma14g02006 14 51013161 51020464 Gma18g00486 18 4546098 4554180 PCT
Gma14g02006 14 51013161 51020464 Gma11g02020 11 33799023 33807474 PCT