Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g02004 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCAAATCCCAATCCTCACAATGCCAATGCCGCATCCCAGCTACCGCGTCCACCGCCGGCCACCACCGCCGGCGCCGGCGCCTCCTCGTCCTCGCTGTTCGCGCGCTCCGGCGGGCCTCACCACCGGCGAGCCCATTCGGAAGTGAGTTTCCGGCTGCCGGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCGCCGGCGGGTCGTCGACGGCCAGCATGGAGGAGATCGGATCGGAGGACGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCGGCGGCGCAAACGGGTCGGGCGCCTCCGGAAACGGAGCGGATCCGACCGGCGAAACCGAGAAGAGTCCGGCGAGGCCGCGACACCGGCACAGTAGCTCCGTCGATTTCGGGGAAATTATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCGAAGGAGAGAAAAGCGCGCTACATACAAGAACTTGAGCGCAAGGTTCAGACTCTTCAGACGGAAGCCACAACTCTTTCTGCCCAATTGACCTTATACCAGAGGGACACAACAGGACTGAGTACTGAAAATACAGAGCTAAAGCTCCGTTTGCAAGCCATGGAGCAACAAGCACAACTTCGTGACGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGGCTTAAGGTTGCTACTGGTGAGATGATGAGCCACACTGATTCCTTTAATCTGGGAATGCACCTGATGCCATTTTCCGGATCAAATTTCGTTCCAATCCCGCCACAATCAGGTCCTTCTGGTCACCAAAACATGCAGATGCCACCATTTGGTCTCACCCCATCCACAATGCCAAGCCATCTACTGCATCAAACAAGTTCTCATCCATATTCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTCTCGTGAAGTCTGAAGGCCCCTCACTCTCCGCAAGTGAGAGTAGCACTACATTTTGA 1089 0.5363 MQDPSSNPNSNPNPNPHNANAASQLPRPPPATTAGAGASSSSLFARSGGPHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGASGNGADPTGETEKSPARPRHRHSSSVDFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSGHQNMQMPPFGLTPSTMPSHLLHQTSSHPYSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSASESSTTF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g02004 362 Coils Coil 228 259 - -
Gma14g02004 362 MobiDBLite consensus disorder prediction 281 314 - -
Gma14g02004 362 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Gma14g02004 362 CDD bZIP_plant_RF2 165 214 IPR044759 GO:0003700|GO:0006355
Gma14g02004 362 MobiDBLite consensus disorder prediction 1 143 - -
Gma14g02004 362 Pfam bZIP transcription factor 164 219 IPR004827 GO:0003700|GO:0006355
Gma14g02004 362 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 359 - -
Gma14g02004 362 MobiDBLite consensus disorder prediction 124 143 - -
Gma14g02004 362 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Gma14g02004 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Gma14g02004 362 MobiDBLite consensus disorder prediction 342 362 - -
Gma14g02004 362 Gene3D - 163 215 - -
Gma14g02004 362 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 359 - -
Gma14g02004 362 Coils Coil 180 207 - -
Gma14g02004 362 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g02004 Gma-Chr14 50963391 50965817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g02004 1 362 bZIP Transcription Factor Family AT2G40620 51.880 9.57e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma14g02004 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g02004 - - gmx:778172 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g02004 14 50963391 50965817 Gma02g02228 02 48274167 48277096 GST
Gma18g00491 18 4587947 4591091 Gma14g02004 14 50963391 50965817 PCT
Gma11g02002 11 33383794 33387129 Gma14g02004 14 50963391 50965817 PCT
Gma14g02004 14 50963391 50965817 Gma18g00491 18 4587947 4591091 PCT
Gma14g02004 14 50963391 50965817 Gma11g02002 11 33383794 33387129 PCT