Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01968 ATGTCCGAAAACGGAGAAGAGAAATTACTCGCTGTGGCGCGGCACATAGCCAAAACGCTGGGCCACAACAACACCATGTCTGATGACATATTCCAAATACTATCGAACTTCGATGGAAGATTCTCGAGAGAGAATCTTTCTGAGAAGGGCGCAGATGTGGATCCCAGAGGCTGCGCCGCACTGGATCATTCCCTCAAATCCCTAGACCGCCGGATCTCTCCCTACGTCTCCTCCGACCGCACAATCTGGGCCGACGCCGCCGATTCTGCTGCCTTCCTCGACGCCGTGGACGAGCTCGTCGCCGTCGTCGCCGAGTGGAACCACCTCGCCTCCGACAAGTCCGTCGCCGCCTGCCTCGTCCGCGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGCTCGCTCATGGAGCGCGGCGGCGAGGCCTTCGACCTCACTCGGAGCCACCGGAAAGGCGACTCAGCGGGGAATTTGCCGTTCGAGTCAGACGAAGACGTCGACGAAGAAGAAGAAGAAGCGCGGAACGTTGGAATAGGAGGAGGAGACGAGGAGGAGCAGATTCCGGTGGCGCTgccggtcacggacttcgacatcgtcatcgacgcactgccgtcggggacgatcaacgacctgcacgagatcacgaagcgaatggtggcaggaggcttcgggaaggagtgctcgcatgtgtacagcagttgccggagggagttcttggaagaaagcgtgtcgagattagggttacagaagctcagcatcgaggaggttcacaagatgacgtggcaggacctcgaagacgagattgagaaatggattaaagcctccaacgtcgctctcaagatcctcttccccagcgagcgccgtctctgcgaccgcgtcttcttcggattcgcctccgccgcggacttctctttcatggaggtctgccgcggatcggcgattcagctgctgaatttcgccgacgccgtcgcgatcgggagccggtcgccggaaaggctgttccgaatcctcgacgtgttcgagacgctgcgtgacctatttccggagttcgaggctctgttttctgatcagtttagtgtgtcgctcaggaatgaagcgattacgatttggaagagGGGTCATCTTAGGAGTCCTGGCTCTGGAAGAGGGCATCTTGTATGCTTGGAGACTTATGGTTCCTTTGGTGGAAATTTCatacttgttatccgagaccagatagaacatgaattctttgaccacacaaatcgtgacatggctgaagcagatcttcatcttcctttggagtctgtttccaaagctgtgaatggaaaaccaTAG 1332 0.2935 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGADVDPRGCAALDHSLKSLDRRISPYVSSDRTIWADAADSAAFLDAVDELVAVVAEWNHLASDKSVAACLVRAEDMLQHAMFRLEDEFRSLMERGGEAFDLTRSHRKGDSAGNLPFESDEDVDEEEEEARNVGIGGGDEEEQIPVALPVTDFDIVIDALPSGTINDLHEITKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEEVHKMTWQDLEDEIEKWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLFPEFEALFSDQFSVSLRNEAITIWKRGHLRSPGSGRGHLVCLETYGSFGGNFILVIRDQIEHEFFDHTNRDMAEADLHLPLESVSKAVNGKP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01968 443 SUPERFAMILY Cullin repeat-like 83 377 IPR016159 -
Gma14g01968 443 Pfam Exo70 exocyst complex subunit 275 376 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma14g01968 443 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 377 IPR004140 GO:0000145|GO:0006887
Gma14g01968 443 Gene3D Exocyst complex component Exo70 81 381 - -
Gma14g01968 443 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 377 - -
Gma14g01968 443 MobiDBLite consensus disorder prediction 152 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01968 Gma-Chr14 50502020 50509593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01968 1 377 EXO70 exocyst subunit family AT5G58430 68.966 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01968 K07195 - gmx:100803694 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01968 14 50502020 50509593 Gma02g02190 02 47819505 47821470 GST