Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01942 ATGCCGACTCAAACCGAGTCACCCAGCAACTCACTGAGTCAACTCGCTGAGAACATGTTCTCCGACAACAACCGCAACATCATGCTCGCAGCAATTATTTTCTTGCTCCTAGTTATCCTCTTCGTCCTCCTACTCCATGTGTACGCCAAATGGTTCTTATTCCAGGTACAATCACGTTCCCAGACTCGGCGGCGGCGAACTCCGGTGACCGTCTCCGGCGTTCTGGAACCTTCCCATTTCCACAGCATCAACATAGAAGCCTCACCCACGTGCTCCAAAGGCCTTGATTCGGCCACACTTTCGGCGATTCCCTTGTTTGTGCAAGGACCAGAGAAAACAGAGGAAACGGAGGAATTGGAATGTGTCATTTGCTTGAGCGTTATTGAGGAGGGTGAGATAGGAAGGAGATTGCCGAAGTGTGGCCACGCTTTTCACATGGAGTGCATTGATATGTGGTTGAGTTTACATTGCAATTGTCCAATTTGTAGAGCTCCTATTGTTGTTAGTGGCGATTCTCATTTGGGTTCTGTTGATGGTGATAGTGATGGTGTGGTTGAGATTGGGGTTGTTACACCGGGTTATGAGATTAGTGGGAGTGAACATGGTGGGGTGAGTGGTTCTGTTCCTGAAGCTTCTTCATCTTTGTTGGGTTTCTCTCTGAAGAGATTGCTGAGTAAGGTTTTTCTGTCACCTGATCATGTAACTGAATTGGATGGTTCACATTGA 726 0.4766 MPTQTESPSNSLSQLAENMFSDNNRNIMLAAIIFLLLVILFVLLLHVYAKWFLFQVQSRSQTRRRRTPVTVSGVLEPSHFHSINIEASPTCSKGLDSATLSAIPLFVQGPEKTEETEELECVICLSVIEEGEIGRRLPKCGHAFHMECIDMWLSLHCNCPICRAPIVVSGDSHLGSVDGDSDGVVEIGVVTPGYEISGSEHGGVSGSVPEASSSLLGFSLKRLLSKVFLSPDHVTELDGSH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01942 241 CDD RING-H2_EL5_like 121 163 - -
Gma14g01942 241 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Gma14g01942 241 SUPERFAMILY RING/U-box 111 169 - -
Gma14g01942 241 Pfam Ring finger domain 120 163 IPR001841 -
Gma14g01942 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Gma14g01942 241 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 236 IPR044675 -
Gma14g01942 241 PANTHER - 1 236 - -
Gma14g01942 241 SMART FANCL_C_2 117 171 - -
Gma14g01942 241 SMART ring_2 121 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01942 Gma-Chr14 50201522 50202247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01942 26 164 Rapid Response to Elicitors AT3G16720 38.298 1.37e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01942 - - gmx:100777829 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01942 14 50201522 50202247 Gma02g02166 02 47530909 47531625 GST
Gma18g00569 18 5510927 5511742 Gma14g01942 14 50201522 50202247 PCT
Gma11g01899 11 23910128 23915820 Gma14g01942 14 50201522 50202247 PCT
Gma14g01942 14 50201522 50202247 Gma18g00569 18 5510927 5511742 PCT
Gma14g01942 14 50201522 50202247 Gma11g01899 11 23910128 23915820 PCT