Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01938 ATGGTTTCGTCAGTTTCGTGGGTGAGAGGCAAGTGCGTCGGTAAGGGCGCGTTTGGGGTTGTCAACGTGGCGGTTTCGAAAAGAGATAATCGCGTTTTCGCGGTGAAGTCCGTGGATTGCGGAAGGGGGCTTTCTGGTCAGGTGGAGGCGTTGGAGAACGAGATTGGGATTCTGAAACGAGTTACCTCGCCGCACGTGGTGGCTTATATCGGCGACGATGTCACGTGCGAGGGAACGGCGTCGTTCAGGAACCTTCATTTGGAGTACATGCCAGGTGGCACCGTCGCTGATTTGGACCGCGCTGACGTGGACGAGCGGTTAGTGAGGCGCTACGCGTGGTGCCTCGCGACCGCGCTGCGTGACGTCCACGCGCAAGGCTTCGTCCACTGCGACGTGAAAGGGAGGAACGTGCTTCTCTCCGGCGACGGCGAAATGGCGAAGCTCGCCGACTTCGGCGCGGCGGTGGAAATTGAATCCTCTCCGGCGATGTTGCTGTTCCCGCGGGGGAGTCCGATGTGGATGGCGCCCGAGGTGGTGCGCCGGGAGCGGCAGGGGCCGGAGTCCGACGTGTGGTCGCTCGGATGCACGGTGATCGAGATTGCCATCGGGAAACCGGCGTGGGAGGACCGCGGCGTCGACACGCTGAGTCGAATCGGTTACTCGGACGAGTTGCCGGAATTTCCAATCCAGTTGTCGGAGCTAGGGAAGGATTTTCTCGAGAAGTGTCTTAGAAGAGAACCGAGTGAACGGTGGAGTTGCGATCAGTTGCTTCAGCATCCATATTTGCTTCCCTACTACGCCCTTGTTGAATCGTCGCCTCGGTGCGTTCTCGACCGGGTTGACTCGGAGTTGAATTCCGAGTCAGATTATAACGACCGTGATCATCAAGAAGAGGTGTTTTCAATATTTACTAACATCGAAGAAAATTCAGTTATTAAAAATAGAATAAGTAAATTAGCGACAGAGTCGAGGGTAAATTGGGAAACACATGGTTGGGTAGTGGTGAGGGAAGTTGAGTCCAACGGAGAACCAACGACAACGGGAACAGAGGAAGAAGGAGCGTGTACGTGTGAGCGTGATGGTGTTGGTTCCAACAAAGAAGGGGTAAATTGGGAATTTCACAATGTGGCAGAGACTGGTATGGTATATTCGGATTCTGTAGGGGCAAATCGGAGAATAAGAAAGTTTGGTGGGAGTAACACCGCTGGAGGGGGTGTTGGTTGTTGCTGTCGGTATGGGTGTGGATGGGAAAAGTTGGTGAGAAATGATGCACAGTTGGACACATGA 1287 0.5447 MVSSVSWVRGKCVGKGAFGVVNVAVSKRDNRVFAVKSVDCGRGLSGQVEALENEIGILKRVTSPHVVAYIGDDVTCEGTASFRNLHLEYMPGGTVADLDRADVDERLVRRYAWCLATALRDVHAQGFVHCDVKGRNVLLSGDGEMAKLADFGAAVEIESSPAMLLFPRGSPMWMAPEVVRRERQGPESDVWSLGCTVIEIAIGKPAWEDRGVDTLSRIGYSDELPEFPIQLSELGKDFLEKCLRREPSERWSCDQLLQHPYLLPYYALVESSPRCVLDRVDSELNSESDYNDRDHQEEVFSIFTNIEENSVIKNRISKLATESRVNWETHGWVVVREVESNGEPTTTGTEEEGACTCERDGVGSNKEGVNWEFHNVAETGMVYSDSVGANRRIRKFGGSNTAGGGVGCCCRYGCGWEKLVRNDAQLDT 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01938 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Gma14g01938 428 ProSiteProfiles Protein kinase domain profile. 7 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01938 428 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 361 - -
Gma14g01938 428 CDD STKc_MAPKKK 6 262 - -
Gma14g01938 428 SUPERFAMILY Protein kinase-like (PK-like) 7 321 IPR011009 -
Gma14g01938 428 SMART serkin_6 7 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01938 428 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 361 - -
Gma14g01938 428 Gene3D Transferase(Phosphotransferase) domain 1 6 332 - -
Gma14g01938 428 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01938 428 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01938 Gma-Chr14 50154092 50155690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01938 7 343 MAP Kinase Kinase Kinase AT2G30040 56.305 1.05e-123 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma14g01938 Pkinase 3.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01938 - - gmx:100776227 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01938 14 50154092 50155690 Gma02g02161 02 47467272 47471932 GST
Gma18g00572 18 5541056 5547513 Gma14g01938 14 50154092 50155690 PCT
Gma11g01903 11 23999680 24002127 Gma14g01938 14 50154092 50155690 PCT
Gma14g01938 14 50154092 50155690 Gma18g00572 18 5541056 5547513 PCT
Gma14g01938 14 50154092 50155690 Gma11g01903 11 23999680 24002127 PCT