Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01927 ATGGGAGATTTTAGTGATGATGAGGATCTCATGTCGTCCGAGATCACCTTCTACTGGGATGTTATCGGCACAAAACCAAGCTTAACTTCCTTGTTTTGTGTCTCTTTCTCCCAAGATTCTGCCGAGGTCTTAAGGGAATATATTATTATCTCCATGTGCGGTGTTTCCAAGGGGAAACCTTCTCAATTTGGTTTGGTCATGGAGGAGTATGCAAAAGAAGGGATGCATCATATAATTTCAGCTTTGCTTGAGTTTTCTGCAGCAGATGATCTGGTTAGTTTCAAAGATGCGGTTGAAAAGGAGGGTCATGATATTGATGGGGTAGGGTTTTGGTATGGAAGGTGTGTTGCCTCGAAGAAAATAGGTTATGAAGAGAGGACACCTCTCATGGTTGCTTCCATGTTTGGAAGCCTTGGTGTATCAACCTATATCCTTTCAACGGGTAGTGTCGATGTTAATTGGGCTAGTAGGTCAGATGGGGCTACTGCTCTTCATTGTGCTGTTGCTGGGGGTTCTGCCGCTTCCATTGAGGTTGTCAAGCTTTTGCTTGATGCATCTGCTGATGTTAATGCTATTGATGCCAACGGTAACCGGCCAATTGACTTGATTGGCTCGGTGACCAATTCTATCTTCAGTCAAAGGTCAAGGGTGCTACAGGCCCTCCTGGAGGGTACAAGTGATGCTGATCAGGCATGTCTTGCACTTCCAGAAGTGATTGACCAAATTGAGGAACAAAGGCAAGATATGACTACGCCCCGTGTTTCGAAAGATTATCCCATTGATCTCTCCCTTCCAGACATAAAGAATGGGATATATGGTACTGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCGAGGGCGTATTCTCATGATTGGACTGAGTGCCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGGCGTGATCCAAGGAAATATCATTACAGCTGTGTCCCTTGTCCCGAGTTCAGGAAGGGGTCTTGCAGCAAGGGCGATACCTGTGAGTATGCACATGGTATTTTTGAGTGCTGGCTTCACCCTGCCCAGTACCGGACGCGGCTTTGCAAGGATGAGAGTGGATGCACAAGAAGGGTTTGCTTCTTTGCTCACAAGCCTGAGGAGCTTCGCCCCTTGTATGCTTCTACTGGTTCCGCTATTCCTTCTCCAAGGTCCTATTCTGCTAGTGCTTCTGCATTGGAGATGGGTTCAGTTAGTCCAATTGCACTTGGTTCTCCATCTGTCTTGATGCCACCTACCTCAACACCACCTTTGACTCCATCTGGAGCATCTTCTCCCATTGCTGGATCCATGTGGTCTCAATCTAATGTTTCTGTCCCTACCCTGCAGCTGCCCAAAAGCAGATTGAAGACCGCATCAACTGCAAGAGACATTGATTTAGATATTGAACTGCTTGGACTTGAAACACATCGGCGTAGACAGCAGCTAATGATGGATGAGATATCTGCTCTTTCCTCTCCCAACTGGAAAAATTCCATGCCTAATAGTCCATCTTTCCATGTTCCTTTGAGTGATCACACTGAGTTAAATAGGCTTTCAGGGGTGAAGCCTGCTAACCTTGAAGATATGTTTGGATCACTCGATCCATCAATTTTGTCTAAATACCATGGAATCTCACTTGATGTTGCAGGAACTCAGTTGCAATCTCCAACCGGAATCCAGATGCGCCAGAATGTGAACCAGCAGCTAGGAGGCTATTCATCCAGCCTTTCTACTTCGAATGTGATTGGGTCACGCTCCTTCAGGCTTGATCAGTCTGGCGAAGCAGCCACGGTTGCCTTGAATCCAAGAGCTGCTGCCTTTGCAAAGCGGAGCCAGAGCTTCATTGAGCGTAGCGTGGTGAACCATCATTCTGAGATTCCTTCTCCAAATCCCTCTACCTTCTCTAACTGGGGCTCACCTGGTGGAAAATTAGATTGGGCCATAAATGGAGAAGAGCTGAATAAGCTGAGGAAATCTGCTTCCTTTGGATTTCGAAGCAGCAGTAGTCCTCTAACAAAGGCTTCAAACAAAATTTCAGCAAATGTTGATGATGAGCCAGATGTGTCTTGGGTTAACTCACTTGTGAAGGATGCTCCACCAGAATCCGGTGAATATAGTGTGGAAGATCATCGAAAGCTACTGCAATGCCACAACGGAACAGATGCGATTCCAGCATGGCTGGAGCAATTGTACTTGGACCAGGAGCAAATGGTGGCGTGA 2226 0.4641 MGDFSDDEDLMSSEITFYWDVIGTKPSLTSLFCVSFSQDSAEVLREYIIISMCGVSKGKPSQFGLVMEEYAKEGMHHIISALLEFSAADDLVSFKDAVEKEGHDIDGVGFWYGRCVASKKIGYEERTPLMVASMFGSLGVSTYILSTGSVDVNWASRSDGATALHCAVAGGSAASIEVVKLLLDASADVNAIDANGNRPIDLIGSVTNSIFSQRSRVLQALLEGTSDADQACLALPEVIDQIEEQRQDMTTPRVSKDYPIDLSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDTCEYAHGIFECWLHPAQYRTRLCKDESGCTRRVCFFAHKPEELRPLYASTGSAIPSPRSYSASASALEMGSVSPIALGSPSVLMPPTSTPPLTPSGASSPIAGSMWSQSNVSVPTLQLPKSRLKTASTARDIDLDIELLGLETHRRRQQLMMDEISALSSPNWKNSMPNSPSFHVPLSDHTELNRLSGVKPANLEDMFGSLDPSILSKYHGISLDVAGTQLQSPTGIQMRQNVNQQLGGYSSSLSTSNVIGSRSFRLDQSGEAATVALNPRAAAFAKRSQSFIERSVVNHHSEIPSPNPSTFSNWGSPGGKLDWAINGEELNKLRKSASFGFRSSSSPLTKASNKISANVDDEPDVSWVNSLVKDAPPESGEYSVEDHRKLLQCHNGTDAIPAWLEQLYLDQEQMVA 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01927 741 SUPERFAMILY Ankyrin repeat 121 201 IPR036770 -
Gma14g01927 741 Gene3D - 66 230 IPR036770 -
Gma14g01927 741 SMART ANK_2a 124 154 IPR002110 GO:0005515
Gma14g01927 741 SMART ANK_2a 159 191 IPR002110 GO:0005515
Gma14g01927 741 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 321 341 IPR000571 GO:0046872
Gma14g01927 741 PANTHER UNKEMPT FAMILY MEMBER 69 740 IPR045234 -
Gma14g01927 741 Pfam Ankyrin repeats (3 copies) 117 193 IPR002110 GO:0005515
Gma14g01927 741 ProSiteProfiles Ankyrin repeat region circular profile. 159 193 - -
Gma14g01927 741 ProSiteProfiles Ankyrin repeat profile. 159 194 IPR002110 GO:0005515
Gma14g01927 741 ProSiteProfiles Zinc finger C3H1-type profile. 321 343 IPR000571 GO:0046872
Gma14g01927 741 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 69 740 - -
Gma14g01927 741 Gene3D - 317 379 - -
Gma14g01927 741 SMART c3hfinal6 351 374 IPR000571 GO:0046872
Gma14g01927 741 SMART c3hfinal6 316 342 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01927 Gma-Chr14 49986211 50000011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01927 77 736 C2H2 Transcription Factor Family AT5G12850 39.232 6.63e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma14g01927 Ank_2 1.7e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01927 - - gmx:100819521 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01927 14 49986211 50000011 Gma02g02149 02 47297637 47300788 GST