Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01921 ATGCACATGAACACCTACTCTGAAGCCACCACATCACAACCAATGCCACCCACCATGGATGAAGATTTGGAGAACAACACGGAGGATTGCAACAATGCAATGACTCCGATGGTGAGAAAGAAGTCAGAACTAGTTGTGGTCACAAATAATGACTCTCGTTTCCAAATGCTTAGAAATTTCATGACCAATTTGCAAGAGGTCATCTTCGGTACTAAGCTTGTGGTGCTTTTTCCGGCAGTCCCTTTGGCTGTTGTTGCAAATTTTTATAGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTACTTGGACTTGCTCCGCTAGCTGAACGTGTTAGCTTCCTGACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTGAATGCAACATGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCACCAGAACAAAGTTCATGTTGTGAAGTTGTCTTTGCTGGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTCCTCTGTGGTGGTTTAGCCAATCTTAAGAGAGAACAAAGATATGACAGAAAGCAGGCAGATGTAAACTCACTGCTTTTGTTGCTGGGATTATTGTGCCATTTGCTGCCATTGCTATTCAAATACGCCTTAGGAGGAGGCAATCATTCTATAGCCACTAGCACTCTTCAGTTGTCAAGAGCAAGCAGCATTGTTATGCTTCTAGCATATGTTGCTTACATCTTCTTCCAATTGAAAACCCATAGAAAATTGTTTGATGCACAAGAGGTGGACGAAGAAGAGGAAAAGGCAGTGATAGGATTTTGGAGTGCATTTACGTGGTTGGTGGGTATGACATTGGTCATATCTCTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTGCCAATTGTTGGAAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGgacatatctttgggtgttgccatgggatctgcaacccaaatttctatgtttgtggttccattaagtgtagttgttgcatggataatgggtataagaatggatttggacttcagtcttcttgaaactggatgccttgcttttacaattataattacagcgttcactttacaggatggaacttcacactacttgaaaggagtgattcttacactatgttacgtggtcattggtgcatgtttttttgttctcaaaactcctctaattgggcaatctcctaaggccagttttggagctaaaaccatcctttga 1329 0.3266 MHMNTYSEATTSQPMPPTMDEDLENNTEDCNNAMTPMVRKKSELVVVTNNDSRFQMLRNFMTNLQEVIFGTKLVVLFPAVPLAVVANFYSFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALGGGNHSIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRKLFDAQEVDEEEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIITAFTLQDGTSHYLKGVILTLCYVVIGACFFVLKTPLIGQSPKASFGAKTIL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01921 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma14g01921 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 24 431 - -
Gma14g01921 442 TIGRFAM caca2: calcium/proton exchanger 59 421 - -
Gma14g01921 442 MobiDBLite consensus disorder prediction 1 20 - -
Gma14g01921 442 TIGRFAM cax: calcium/proton exchanger 78 421 IPR004798 GO:0006816|GO:0015369
Gma14g01921 442 Pfam Sodium/calcium exchanger protein 95 252 IPR004837 GO:0016021|GO:0055085
Gma14g01921 442 Pfam Sodium/calcium exchanger protein 278 416 IPR004837 GO:0016021|GO:0055085
Gma14g01921 442 Gene3D - 124 421 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01921 Gma-Chr14 49888162 49892964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01921 31 426 Antiporters AT2G38170 67.327 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01921 K07300 - gmx:100816844 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01921 14 49888162 49892964 Gma02g02143 02 47215857 47221376 GST
Gma18g00594 18 5847360 5852236 Gma14g01921 14 49888162 49892964 PCT
Gma11g01967 11 28783296 28787123 Gma14g01921 14 49888162 49892964 PCT
Gma14g01921 14 49888162 49892964 Gma18g00594 18 5847360 5852236 PCT
Gma14g01921 14 49888162 49892964 Gma11g01967 11 28783296 28787123 PCT