Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01898 ATGAAGAAAACACCACCCCCCAATTTGCATCAATCTAGCCAAAGTAGACAGAATGCTAATCTCCAATTTGTTGGAACAAACAATGATGCAAAGAGGCACAGTTCTAAGACACTGAGATCTTTGAAGTATGCTGCCAAGAAATGTGCAGCTGTTTTTTCATTGTTTCTCTATGGCAAAAGAAAATCAGCCTCATATGTTGTTGGGAATGATGGCAGAAAGAATACATCCAAAGTTAGAGGGGTGGTATCATCATCAACTGATTTGTCATCTGAGAGTACCACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCTTACGCATCATCCATTACTGCAAGTGGACAACTTGGAATTGGCAACTTTTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGCTAATGAAATTGGGCAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTTGCCGTGAAGCGTGCCAAGAAGGATGTAATACACAATCACTTACATGAGTTCAAGAATGAAATATACACCTTGTCACAAATTGAGCATCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATACGTTGGTAATGGTAACCTTCGAGAACATCTAAATGGTATTCGGGGAGAAGGACTAGAAATTGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAGTAACTTACCTGCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCGAACATCTTAATCACTGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGATTTGCACGGTTGTCTGATGATCCTAATGCaactcatatttcaactcaagttaaaggaacagctggatacatggatcctgagtatcttagaacataccaactaactgaaaagagtgatgtttattcctttggtgtattgcttgttgaaatggtGACAGGACGGCATCCAATAGAACCAAAGAGACCAGTTGATGAGAGAGTTACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCATCAAGGCAGTAAAGCAGGTTCTCAAGCTAGCTCTCCAATGTGTTGCGCCTTCAAAACAATCACGGCCGCCTATGAAGAATTGTGCAGAGGTTCTGTGGGACATCCGCAAAAGTTTTAGAGATGAAGCCAATTCTGATCATCCTCCCCTTCCTTCTCACCATTCTGCAAACTTTCCTCAAAGAGAAAAGAATAAGTTTGGTATTGAAGATGATGACAGCTATAAATTTGTCTCTGTACCTAATCATATTCGTTCATAA 1377 0.3689 MKKTPPPNLHQSSQSRQNANLQFVGTNNDAKRHSSKTLRSLKYAAKKCAAVFSLFLYGKRKSASYVVGNDGRKNTSKVRGVVSSSTDLSSESTTKNSSKWKFSYSYASSITASGQLGIGNFSFEEIYKSTAKFSPANEIGQGGFGTVYKGKLNDGSIVAVKRAKKDVIHNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYVGNGNLREHLNGIRGEGLEIGERLDIAIDVAHAVTYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPNATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMVTGRHPIEPKRPVDERVTIRWAMKMLKQGDAVFAMDPRLRRNPASIKAVKQVLKLALQCVAPSKQSRPPMKNCAEVLWDIRKSFRDEANSDHPPLPSHHSANFPQREKNKFGIEDDDSYKFVSVPNHIRS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01898 458 PANTHER OS01G0253100 PROTEIN 1 438 IPR045271 GO:0004714|GO:0006468
Gma14g01898 458 Gene3D Transferase(Phosphotransferase) domain 1 210 423 - -
Gma14g01898 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gma14g01898 458 SMART serkin_6 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01898 458 SUPERFAMILY Protein kinase-like (PK-like) 115 406 IPR011009 -
Gma14g01898 458 ProSiteProfiles Protein kinase domain profile. 133 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g01898 458 Pfam Protein tyrosine and serine/threonine kinase 137 405 IPR001245 GO:0004672|GO:0006468
Gma14g01898 458 CDD STKc_IRAK 139 405 - -
Gma14g01898 458 MobiDBLite consensus disorder prediction 75 95 - -
Gma14g01898 458 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gma14g01898 458 MobiDBLite consensus disorder prediction 415 442 - -
Gma14g01898 458 PANTHER OS02G0821400 PROTEIN 1 438 - -
Gma14g01898 458 Gene3D Phosphorylase Kinase; domain 1 91 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01898 Gma-Chr14 49638758 49642752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01898 105 398 Receptor kinase-like Gene Family AT1G79620 44.518 6.57e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gma14g01898 PK_Tyr_Ser-Thr 6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01898 - - gmx:100811511 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01898 14 49638758 49642752 Gma02g02121 02 47043209 47047366 GST
Gma14g01898 14 49638758 49642752 Gma18g00965 18 12023373 12027987 PCT
Gma14g01898 14 49638758 49642752 Gma08g02904 08 45345812 45349329 PCT