Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01891 ATGGGCCTCTCTAGTCTCCCAGCACCATCTGAAGGAGTATTATGTGTCCTTCTGGTGAACACTGTATTGTCAATTTCCATATTCAAAGGCATTGTAAGGACAATCCTGCACATTGTTGGCATCCATCTTCCATCATCCTCCACTTCACCCTCTTCACCAGATCCCTCCCAAGCCGCACCTGAGTCATTTGAATTGCATCTTAGTCCCTCGGAGAGTTACATTGAAGAGTTCAGAAGCCGGACACCGACACTTCGGTTTGACAGTGTGTGCTGCTCTAAACGACTTGAACATGACTGCTCTGTATGCCTCACTCAGTTTGAACCCGAATCAGAGATAAACCGCTTATCGTGCGGTCATCTCTTCCACAAAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCCGGACTCCCTTGATGCCCGAAGATGACACACCTTGCTTTCAGTAA 465 0.4796 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAAPESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDTPCFQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01891 154 Pfam Ring finger domain 98 141 IPR001841 -
Gma14g01891 154 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 152 - -
Gma14g01891 154 SUPERFAMILY RING/U-box 98 147 - -
Gma14g01891 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Gma14g01891 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 146 IPR013083 -
Gma14g01891 154 PANTHER - 1 152 IPR044249 -
Gma14g01891 154 SMART ring_2 99 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01891 Gma-Chr14 49610365 49612315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01891 1 148 C3H Transcription Factor Family AT2G04240 64.935 2.79e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01891 K16285 - gmx:100305532 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01891 14 49610365 49612315 Gma02g02117 02 47014062 47015861 GST