Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01888 ATGGGAGAGGGAGAGAACACAGAAATAGAAACAGAAACAGAATCAGAAGCAACATCGACATGGAGCCTCGGAAAACACACTCAGATAATCGAACTTTCGGAGACGCTGACGAACGGGAACCTCAGCGCCAAGATTGAGGCCGCGAGGGAGATAAGGAAGATGGTTCGGAAATCGTCGTCGTCGTCGTCGAAGACGCGCGCGAAGCTCGCCGCAGCGGGTGTGATTGAACCGCTCGTGCTGATGCTCTCTTCTTCCAACGTCGACGCTCGCCAATCCTCGCTCCTCGCCCTCCTCAACCTCGCTGTTCGCAACGAACGAAACAAGGTCAAAATAGTGACAGATGGTGCCATGCCTCCACTGGTGGAGCTCCTCAAGATGCAAAATAGCAGTATACGAGAATTAGCTACAGCTGCAATCTTGACACTCTCAGCTGCTGCATCCAACAAGCCAATTATTGCCGCATCTGGAGCTGCACCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAGCCCTCCATAATCTTTCTACTAGCATTGCGAATTCCATTGAACTCCTTGATGCAAGTGCTGTTTTCCCTCTGCTCAACCTCCTTAAGGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAGCACTGCTTGAAATCCTTTCCAACTCCGAAGAAGGACGAACGGCAATCTCAATTGCAGATGGTGGAATCTTAACACTAGTAGAGACAGTTGAAGATGGATCACTTGTCAGCACAGAACATGCTGTTGGAACCCTGCTATCATTATGCCGAAGCTGCCGAGATAAATACCGGGAACTGATTCTCAAAGAAGGAGCAATTCCGGGTCTGTTACGTCTGACAGTGGAGGGCACAGCTGAAGCTCAAGATAGAGCGCGTGTGCTTCTGGATTTGCTCAGAGATTCTCCCCCTGAAAAAAGACTAACCTCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGGGTAGATGGAGCAGATAAAGCTGCTGAAACTGCCAAACGGTTATTGCAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGTACTCCTTCTATTCCATCCACTTGA 1140 0.4807 MGEGENTEIETETESEATSTWSLGKHTQIIELSETLTNGNLSAKIEAAREIRKMVRKSSSSSSKTRAKLAAAGVIEPLVLMLSSSNVDARQSSLLALLNLAVRNERNKVKIVTDGAMPPLVELLKMQNSSIRELATAAILTLSAAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIANSIELLDASAVFPLLNLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSLVSTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSPPEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPSIPST 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01888 379 SMART arm_5 62 102 IPR000225 GO:0005515
Gma14g01888 379 SMART arm_5 229 270 IPR000225 GO:0005515
Gma14g01888 379 SMART arm_5 103 144 IPR000225 GO:0005515
Gma14g01888 379 SMART arm_5 145 185 IPR000225 GO:0005515
Gma14g01888 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 197 241 IPR000225 GO:0005515
Gma14g01888 379 PANTHER U BOX DOMAIN-CONTAINING 12 345 - -
Gma14g01888 379 MobiDBLite consensus disorder prediction 1 20 - -
Gma14g01888 379 SUPERFAMILY ARM repeat 34 327 IPR016024 -
Gma14g01888 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 73 115 IPR000225 GO:0005515
Gma14g01888 379 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 345 - -
Gma14g01888 379 Pfam Armadillo/beta-catenin-like repeat 148 184 IPR000225 GO:0005515
Gma14g01888 379 Pfam Armadillo/beta-catenin-like repeat 104 143 IPR000225 GO:0005515
Gma14g01888 379 Gene3D - 16 373 IPR011989 -
Gma14g01888 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 115 157 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01888 Gma-Chr14 49570007 49575535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01888 26 313 U-box Gene Family AT3G54790 38.754 7.41e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01888 K08332 - gmx:100782472 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01888 14 49570007 49575535 Gma02g02114 02 46966461 46971705 GST