Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01882 ATGGGTGCTGTTGTGGAGTGCTACCCGCCGCCTCGCACGGCGGTGCTGTCCCTCAACACGCTGCCGTTAGGGTTCCGTTTCCGTCCCACCGATGAGGAGCTTATTGACTACTACCTGCGCTCGAAGATCAACGGAAATAGTGACGATGTTTGGGTTATTCGTGAGATTGATGTCTGCAAATGGGAGCCTTGGGACTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGACCGGAAGTATCCAAACGGGCACAGGTTGAACCGAGCTACGAATCATGGCTATTGGAAGGCGACGGGGAAGGATCGAAAGATTAAGTCTGGCTCCACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTATACCGGTCGTGCTCCCAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCTTGAAGGAGCTTGAAGGAACCAATCCTGGACAGAATCCATATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAGCTTCAAACGGTGATGATGTGGAGCGGACTGCTTCAACTCCTACAACTGCCAATTACTGTCCCGACGAAATACAATCTGATTCAGCTCTGGTTCCAGCATCTTCCTCACAGGTTACTGAAGATGATAAGCCTCTACCAGTTATTTCCGAGAACTCCGAGGAAGCAATATCCAACATTATAACCCCTGGTGATATTCATAGTGACGAATGTGATGCTCCTGATGCACAATATCAAATTGTTGAACCAGTTGCAGAGGAGGATCAGCTGTTGAGCGTGGACATATTTTATGACCCAACAAATCAGCAATTAGACGACAAATTGTTCTCCCCTGTCCATGCACATTTCCCAGCAGATTTTTATTATCAAGCTAACAATCAATCAGAACTTCAGTATGGTACAAGTGAGAATATTTCAGAATTTTTTGACTCTGTTGTTAATTGGGATTCATTCTCTTATGCTACCAGCAGTCTAGATCTGGGCTCATCCTTCCTTAATCCTAAGGACAATGGATCAGGCAGTGACTCAGATGTGGAAATGGCCAATATGCTGCATCTGCAAGCATTACATGATTATCCTAAGGAGGCAGTTGAGGAGAAGTTCAATGTAGGATTATTTCAGAACAATCCCCAGATGGCTTTCTCAAATGATGGTCCTATGGGCCAAGTGCACAATGTGGCCAACTATTGTGAGCAACCAAGAAACTTTGATGCATTTGTTAATGGTGATACTGGAATCAGAATAAGGACTCGTCATGGAAGAAATGAACAGCCAAACATGAACATGATGATACAATCACAAGGTATTGCACCAAGGAGAATACGATTGGGAGTTGTTAGGCGTCCGCTTGGTTCTCAGGAGACAGCAAAAGATGGGAGTTGTGCTTGTGCCCCAGAAGACCATAACTCAAAAACCATCATTAGTGCGGAGAAGAAAGCTTCAGAAAACCATGCTGctgatgagagttccactgtttctgatgagagttccactgttactgatgaTTCTGATGAACCAGAGGAGGCATCTCCCAAGTCAACTGACCCGAGAAAGATAAGTCAGCAACATGTTGCAACTGCAGAATCCATCTCGGGGTCGAAAGACCTTCTAGTGAGCAGAAGGGGCTGCTACACCTCAAAGGTTTCCTCTAATTGCGCCATGTGGTCTTATGTTCTTGCAGTTTCTGCAACTGTATTGGTCTCAGCAATACTCCTTGTTAATATATGGGCATATGTCAGATCTTAA 1773 0.4399 MGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNSDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELEGTNPGQNPYVLCRLFKKQDESLEASNGDDVERTASTPTTANYCPDEIQSDSALVPASSSQVTEDDKPLPVISENSEEAISNIITPGDIHSDECDAPDAQYQIVEPVAEEDQLLSVDIFYDPTNQQLDDKLFSPVHAHFPADFYYQANNQSELQYGTSENISEFFDSVVNWDSFSYATSSLDLGSSFLNPKDNGSGSDSDVEMANMLHLQALHDYPKEAVEEKFNVGLFQNNPQMAFSNDGPMGQVHNVANYCEQPRNFDAFVNGDTGIRIRTRHGRNEQPNMNMMIQSQGIAPRRIRLGVVRRPLGSQETAKDGSCACAPEDHNSKTIISAEKKASENHAADESSTVSDESSTVTDDSDEPEEASPKSTDPRKISQQHVATAESISGSKDLLVSRRGCYTSKVSSNCAMWSYVLAVSATVLVSAILLVNIWAYVRS 590
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01882 590 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 16 437 - -
Gma14g01882 590 MobiDBLite consensus disorder prediction 176 230 - -
Gma14g01882 590 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
Gma14g01882 590 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 437 - -
Gma14g01882 590 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Gma14g01882 590 MobiDBLite consensus disorder prediction 182 219 - -
Gma14g01882 590 MobiDBLite consensus disorder prediction 487 536 - -
Gma14g01882 590 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Gma14g01882 590 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma14g01882 Gma-Chr14 49483659 49487628 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01882 14 452 NAC Transcription Factor Family AT4G35580 44.737 7.62e-98 306
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma14g01882 NAM 3.3e-36 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01882 - - gmx:100778903 1172.15
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01882 14 49483659 49487628 Gma02g02108 02 46878029 46882153 GST
Gma14g01882 14 49483659 49487628 Gma04g02171 04 52157813 52161333 PCT
Gma04g02171 04 52157813 52161333 Gma14g01882 14 49483659 49487628 PCT