Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01869 ATGAGAGGAAGGAGCTATAGTCCATCGCCTCCTCCACGCCACAGCAGAAGAGGAGGAGGAGGGAGGAGTCCCAGCCCCAGGGGCCGCTATCCTCCCCGTCCCAGACAACAAGATCTCCCTACCAGCCTTCTTGTCCGTAACCTTCGTCATGACTGTAGGCCTGAGGATCTACGCCGACCTTTTGGTCAATTTGGTCCTCTCAAGGACATTTACCTTCCTAAGGATTACTACACTGGAgaaccccgtggctttggttttgtccaatatgtggatcctgcggatgctgctgatgctaaatatcatatggatggtcaagttcttcttggtcgggagctcactgttgtctttgctgaggagaatagaaagaagccAACTGAGATGAGGACACGAGAGAGAAGGGGTCGCTTTTATGATCGAAGGAGGTCTCCTCCTCGTTACTCTCGGTCACCCCGCTACTCTCGATCTCCACCACCACGCCATAGATCTCGTTCTCGCAGTCGTGATTATTATTCTCCTCCTGCCAAACGAAGGGAGTATTCAAGATCTGTCTCCCCTGAGGATAGAAGGTACAGTCGAGAAAGATCATTTTCACAGCATAGTAGAGAGAGGTCATACTCACGATCTCCTCCTTATAATGGGGGCTCAAGGAGTCGTAGTCAGAGTCCAGCAAAGGGCCCAGGTCAGAGCAGGAGTCCAAGTCCGAACCGAGATGGAAGGGAACCAGCCCGGGGTAGGTCCCCTAGTCAGTGA 750 0.4373 MRGRSYSPSPPPRHSRRGGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQSPAKGPGQSRSPSPNRDGREPARGRSPSQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01869 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Gma14g01869 249 MobiDBLite consensus disorder prediction 122 249 - -
Gma14g01869 249 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 1 233 - -
Gma14g01869 249 MobiDBLite consensus disorder prediction 1 43 - -
Gma14g01869 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Gma14g01869 249 MobiDBLite consensus disorder prediction 122 145 - -
Gma14g01869 249 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 233 - -
Gma14g01869 249 MobiDBLite consensus disorder prediction 202 235 - -
Gma14g01869 249 MobiDBLite consensus disorder prediction 162 201 - -
Gma14g01869 249 Gene3D - 2 133 IPR012677 -
Gma14g01869 249 SUPERFAMILY RNA-binding domain, RBD 40 146 IPR035979 GO:0003676
Gma14g01869 249 SMART rrm1_1 42 115 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01869 Gma-Chr14 49373411 49376408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01869 41 172 Eukaryotic Initiation Factors Gene Family AT4G34110 26.515 4.90e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01869 K12900 - gmx:100775883 368.237