Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01851 ATGAAACTCCCCTCCATGGCACCTACACTGTCAATTTCTGGATTTCCCCTTTTGTGTTCCTTTGCTTCCCCCTCAGGAAAGAATGCAAGATCTGTTGCTTATACAGGCCAAAAAAAGAAAGTCTGTAATGCATATCATGACAGCAGAACAGATCAAAATACATTTTGGTGGTTAGAAGCACTCCATCATGCTGAGCAGAACAAAGATTTCTCCACTGAGTTGATTAGGAAGATTGAAGAAGCCATTTCAGGAACTTCAAACAATTCAAAGTCATCAAGAGTAGCTTCTCGGATCTCCATAAAAAAAGTTGCTGAACAATGTAATCCAGTTAGAACTGACATCAACAACATACCATATCTTGTTATGAGCAATGTTCTAGTATATAGTTTCCGAAGCATAAGCTCTTTGAAGTATCAAATTCAGACAGGTTTGGATCAGTTAGAGGCCTCTAGAAAAACGCTCCTAGATCAACTGCTAGAAATTGATCAGACAATGGAAAAACCAAATGAAGAAAATATTGAATGTGTGGGTAAATGTCGAAATTGTCAGCCTAATTGTGATGGTCCGTGTGCTTTGTGTGAACTAGATATTTTGTTTCAGGATTATGAAGCAAGACTCTTTGTTCTTAAGAATGAACGTGGAAGGATAATTTCATCTGCTGAGGAGGCAGTGGATTTTCAGAAGAAAAACTTGGCATTGAATCATTTCCTCTCAAAGCTATCACAATCTAGTCACAGTTCTACAGTATCTGATATCAGTCATGAAGAATCAAAGAAAAGGAATGTTGGACAAAGAGTTGTGGTTTCAAAATCAGCATCTGAGTTGGAGCTAATTCTTGGAGTTTTAAACTACTGCAAGTCTCGATTAGGAAGAGACAGTGTCTCAGCTGCCACCAAGCATTTACATGTTTTTGAGGGGATGCGAAAGCAGTTTGGCCACACAAGGTCTTTGGCATTAGCTCAAGCTCAGTATCTGCGTGCACACGATGAAATAAAGATGGCAGTTTCCCGTTTGCACCCAAGGGAAAATGAAGATGATAAATCTCTTGATGATTTAGGTGAAAATGAATTAGCTGCAGCTAGCTCAAACTTTTCCCATGATAAGTTTATGTCATTGACCATGTTGTCACAGATAAAAGGAAAACTCCGCTACTTAAAGGGTTTGGTTCAATCTAAGCAAAAACTGCAATTCGAAAGTCCAAATAGTTCTTTATTCACACGAGAGACAACTGCAATGTCAAACTCTACAGAAGAGAAGGGTGCACTTTTATCTAAGACTGATGATGAAACATGCCCAATTTGCCAAGAAAAGCTAGGCAAACAGAAAATGGTTTTTCAATGTGGGCACGTTACATGCTGTAAATGTTTATTTGCTATGACTGAGAAAAGACTTCAAAATAACAAACTTCATAATTGGGTGATGTGCCCTACATGTCGACAGCATACTGATTTTGGAAACATTGTGTTGATGCACGGAACGAATCTTCCAATCCTTCAGTGCTGCATAGAATTGACAGTAGTGAAAAATTTGAAGCATCCATTAGTGTTTAAGGCTCATATGGAACCAAGATTGAAGCAGTCACAAGAAGAATCCTGTGGGTAA 1602 0.3858 MKLPSMAPTLSISGFPLLCSFASPSGKNARSVAYTGQKKKVCNAYHDSRTDQNTFWWLEALHHAEQNKDFSTELIRKIEEAISGTSNNSKSSRVASRISIKKVAEQCNPVRTDINNIPYLVMSNVLVYSFRSISSLKYQIQTGLDQLEASRKTLLDQLLEIDQTMEKPNEENIECVGKCRNCQPNCDGPCALCELDILFQDYEARLFVLKNERGRIISSAEEAVDFQKKNLALNHFLSKLSQSSHSSTVSDISHEESKKRNVGQRVVVSKSASELELILGVLNYCKSRLGRDSVSAATKHLHVFEGMRKQFGHTRSLALAQAQYLRAHDEIKMAVSRLHPRENEDDKSLDDLGENELAAASSNFSHDKFMSLTMLSQIKGKLRYLKGLVQSKQKLQFESPNSSLFTRETTAMSNSTEEKGALLSKTDDETCPICQEKLGKQKMVFQCGHVTCCKCLFAMTEKRLQNNKLHNWVMCPTCRQHTDFGNIVLMHGTNLPILQCCIELTVVKNLKHPLVFKAHMEPRLKQSQEESCG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01851 533 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 411 490 IPR013083 -
Gma14g01851 533 Pfam Zinc finger, C3HC4 type (RING finger) 431 478 IPR018957 GO:0046872
Gma14g01851 533 ProSiteProfiles Zinc finger RING-type profile. 431 479 IPR001841 -
Gma14g01851 533 Coils Coil 144 164 - -
Gma14g01851 533 SUPERFAMILY RING/U-box 426 483 - -
Gma14g01851 533 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER 33 491 - -
Gma14g01851 533 SMART ring_2 431 478 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01851 Gma-Chr14 49151572 49157111 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01851 K15710 - gmx:100776659 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01851 14 49151572 49157111 Gma02g02080 02 46573943 46587094 GST