Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01850 ATGAAGGGAGGCAGAAAAGCACATGTTGCCATCAGTCAATTTAGAGGAAAACAAAATGGCACAAAAGGATGTGAAGGGTCAACACCAAAATCTATTCAGGTGTTGTTGCTTTTAATTCAACATGGAGCCAATGGACTCAATCTTTTGGAAGCACAGCATGCGGTCCTTGTAGAGCCGTTACTCAATCCAGCTGCTGAAGCACTAGCAATCAGTCGTGTACATCGGATTGGACAAAAAAATAAGACCCTCATTCATCGTTTCATTGTAAAAGACACGGTTGAAGAGAGTATATATAAATTGAACAGAAGCAGGAGCAATCATTCATTCATCAGTGGCAACACTAAAAATCAAGATCAACCTGTTTTAACCCTGAAGGATGTGGAAGCCTTACTGTCTAGAGCACCACTAACAATGCCAGAAAGTGATGAAAATCATAACACAAACACGAATCTTAGACACTTGCCACCATCAGTGGCCACTGCTATAGCTGCTGAGAGGAGACTTAATGAACAAAGGACATGA 522 0.4119 MKGGRKAHVAISQFRGKQNGTKGCEGSTPKSIQVLLLLIQHGANGLNLLEAQHAVLVEPLLNPAAEALAISRVHRIGQKNKTLIHRFIVKDTVEESIYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRAPLTMPESDENHNTNTNLRHLPPSVATAIAAERRLNEQRT 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01850 173 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER 4 154 - -
Gma14g01850 173 CDD SF2_C_SNF 27 88 - -
Gma14g01850 173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 141 IPR027417 -
Gma14g01850 173 Gene3D - 5 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01850 Gma-Chr14 49149257 49151467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01850 25 131 RAD5 or RAD16-like Gene Family AT5G43530 36.449 3.20e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01850 K15710 - gmx:100776659 314.309