Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01847 ATGAATAACATCGTTTGTTTTGCAAGTGAAATTAGTGTCTCAACCCAAAAGAAGAGAGTGATAATCGAAGAACTTCTTAAGGGGCAAGAAGCTGCTACCCAACTCAAGGTTCTTCTTCTTGAGAAGCCCTTTTGGAGTGAAGCCTTTCTCTCTTTTCAGGAAGTCATGGACAATGTTCTGAGATCTTTTTCAGAAGCTCTTTCTATTCTAAACTCTTCTTCTTCTTCTGAACCAGCTGGTTCAGCAGCTGAGGTGGCTCATCGGAGTCTCCTGAATTCCGGCCAAAATGGGTCGCCGGTGGCAGCTTCCGGCGAGAAGAGATTCCAGAAGGATGGGAGAGGTCGCTACAATAGAAGGAAGAGTGCAGTGTCATGGACCATACTCTCATGCACCATTGATGATAATCATGTATGGAGGAAGTATGGACAAAAGAGAGTCTTGAATACTGAATTTCCTAGGAGTTACTTCAGGTGCGGTTACAAGTATGATCAAGGTTGCAAAGCAAACAAACAGGTGCAGCGGGATCAAGAGAATCCGAATATGTACCGAATTACGTACATTGGAATTCACACATGCAATGCCACTCCAAAGGCTACACATTCGGCCACTGATTCTAACACTTGGGAATCATTTCTTCTGAATTCTGATGGTGAGATAATGAGTGATTATGTGCTGACTCTCAACGTCTGGATATGGATTTTGGGGTGCCATCTGTTCATTTTGGCACTGATTTTCCCTTTGACGAAGGTTACTTTCTAA 759 0.4335 MNNIVCFASEISVSTQKKRVIIEELLKGQEAATQLKVLLLEKPFWSEAFLSFQEVMDNVLRSFSEALSILNSSSSSEPAGSAAEVAHRSLLNSGQNGSPVAASGEKRFQKDGRGRYNRRKSAVSWTILSCTIDDNHVWRKYGQKRVLNTEFPRSYFRCGYKYDQGCKANKQVQRDQENPNMYRITYIGIHTCNATPKATHSATDSNTWESFLLNSDGEIMSDYVLTLNVWIWILGCHLFILALIFPLTKVTF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01847 252 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma14g01847 252 MobiDBLite consensus disorder prediction 93 115 - -
Gma14g01847 252 ProSiteProfiles WRKY domain profile. 132 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma14g01847 252 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 219 IPR044810 GO:0003700
Gma14g01847 252 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma14g01847 252 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma14g01847 252 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 4 219 - -
Gma14g01847 252 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01847 Gma-Chr14 49097493 49109118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01847 17 216 WRKY Transcription Factor Family AT3G56400 37.864 3.30e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma14g01847 WRKY 5.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01847 - - gmx:100797129 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01847 14 49097493 49109118 Gma04g02143 04 51910243 51912945 PCT
Gma04g02143 04 51910243 51912945 Gma14g01847 14 49097493 49109118 PCT