Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g01840 ATGTCCAAGCCACTGCTAGGCATAGGGGAGGAGGAAGGTCAAAGCAATGTCACTTTGTTGGTTTCTTCCTCAGTCATCATGGAAAGTGTGTGCCTGAATAGCTCAAAATTGAAAGAGCGCAACTACATGGGGTTATCTGATTGTTCATCTGTGGACAGCTCCGCGCCGTCCTTCTCAGATGAGACTAAAAGCAATCTGAACCTTAAGGCTACTGAGCTGAGACTGGGGCTTCCGGGATTGCAGTCTCCCGAACGAGATTCAGATCTTTGCTTGAGAAGTTCAATTCAGTTTGATGAAAAACCACTGTTTCCTTTGCATCCTGCTACTGATGATCACCATTCCTCATCAAAGCCTGCTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGTCATGAGTGGATTCGCCGAGGAGAAATTGCTTGTTAGTTCTGAGGTCAACACAATATTGTCACCAAGGCCTTCTTCTAATGTGGCATTGAAACCAAGCTCTATGCTTGAGAATGTTGGGGCTCAGCAATCCAAAGCCAAAGAACTCGCAACAGCGAAGGTTGGTCTTGAGAGGTCTCATGTTTTCAATGATAGCAGAACAAATCTGAATGATTCTGCTAATAACAATAGCAGTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAATTCACTGGCCACTACTACAAAGAATGTTGAAGAAGTGGATGGAAAAGCGGGGTCTGGTGCACTGTTTGTAAAGGTCAGTATGGATGGTGCTCCTTATTTAAGAAAAGTAGACTTGAAGAATTACTCTGCGTATGCCGAACTATCTTCTGCGCTGGAGAACATGTTCAGCTGTTTTACCATAGGTTCTTGTGGATCTCATGGAAATCTGGGAGGGGAGGTGCTGAATGAAACCAAGCTGAAGGATCTGCTTCATGGATCAGAATATGTTCTTACGTACAAGGATAAAGATGGCGACTGGATGCTAGTGGGTGATGTTCCCTGGGAGATGTTTATTGAGACATGCAAGAGGCTAAGGATCATGAAGAGCTCCGAAGCCATTGGTCTAGCACCAAGAGCTGTTGAAAAAAGAACCTAG 1095 0.4475 MSKPLLGIGEEEGQSNVTLLVSSSVIMESVCLNSSKLKERNYMGLSDCSSVDSSAPSFSDETKSNLNLKATELRLGLPGLQSPERDSDLCLRSSIQFDEKPLFPLHPATDDHHSSSKPAVLGNKRGFSDVMSGFAEEKLLVSSEVNTILSPRPSSNVALKPSSMLENVGAQQSKAKELATAKVGLERSHVFNDSRTNLNDSANNNSSAPATKAQVVGWPPIRSFRKNSLATTTKNVEEVDGKAGSGALFVKVSMDGAPYLRKVDLKNYSAYAELSSALENMFSCFTIGSCGSHGNLGGEVLNETKLKDLLHGSEYVLTYKDKDGDWMLVGDVPWEMFIETCKRLRIMKSSEAIGLAPRAVEKRT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g01840 364 Gene3D - 242 361 - -
Gma14g01840 364 ProSiteProfiles PB1 domain profile. 247 349 IPR000270 GO:0005515
Gma14g01840 364 SUPERFAMILY CAD & PB1 domains 245 348 - -
Gma14g01840 364 PANTHER AUXIN-INDUCED PROTEIN 23 360 - -
Gma14g01840 364 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 360 IPR003311 GO:0005634|GO:0006355
Gma14g01840 364 Pfam AUX/IAA family 71 358 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g01840 Gma-Chr14 49006730 49010491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g01840 250 358 B3 DNA Binding Superfamily AT1G59750 29.358 3.06e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma14g01840 AUX_IAA 8.5e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g01840 K14484 - gmx:100815447 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01840 14 49006730 49010491 Gma14g01840 14 49006730 49010491 ECH